Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1598
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,662,935 | + | +1.6 | |||
1,663,045 | - | Dshi_1597 | 0.18 | +0.8 | |
1,663,146 | - | Dshi_1597 | 0.27 | -0.8 | |
1,663,324 | + | Dshi_1597 | 0.44 | -2.8 | |
1,663,444 | - | Dshi_1597 | 0.55 | +2.3 | |
1,663,511 | - | Dshi_1597 | 0.61 | +2.0 | |
1,663,602 | + | Dshi_1597 | 0.70 | -0.7 | |
1,663,610 | - | Dshi_1597 | 0.71 | +1.4 | |
1,663,818 | - | -0.8 | |||
1,663,914 | - | +0.8 | |||
1,664,096 | + | Dshi_1598 | 0.22 | +0.9 | |
1,664,579 | + | Dshi_1598 | 0.82 | -0.2 | |
1,664,684 | - | -0.2 | |||
1,664,910 | - | Dshi_1599 | 0.21 | +0.5 | |
1,665,037 | - | Dshi_1599 | 0.36 | +0.8 | |
1,665,337 | + | Dshi_1599 | 0.70 | -0.4 | |
1,665,344 | + | Dshi_1599 | 0.70 | +1.8 | |
1,665,409 | - | Dshi_1599 | 0.78 | +1.8 | |
1,665,643 | + | +0.9 |
Or see this region's nucleotide sequence