Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1551
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,613,139 | + | -3.1 | |||
1,613,151 | - | -1.4 | |||
1,613,271 | + | Dshi_1550 | 0.23 | -0.7 | |
1,613,279 | - | Dshi_1550 | 0.24 | -2.2 | |
1,613,279 | - | Dshi_1550 | 0.24 | -4.0 | |
1,613,334 | - | Dshi_1550 | 0.31 | -0.7 | |
1,613,339 | + | Dshi_1550 | 0.32 | +3.1 | |
1,613,360 | + | Dshi_1550 | 0.34 | -0.8 | |
1,613,434 | - | Dshi_1550 | 0.44 | -3.4 | |
1,613,665 | + | Dshi_1550 | 0.73 | -0.2 | |
1,613,665 | - | Dshi_1550 | 0.73 | -3.5 | |
1,613,826 | - | -0.2 | |||
1,613,848 | + | +3.6 | |||
1,613,869 | + | -0.5 | |||
1,614,453 | + | -0.8 | |||
1,614,463 | - | -3.3 | |||
1,614,506 | + | +0.8 | |||
1,614,597 | - | +0.8 | |||
1,614,698 | + | Dshi_1552 | 0.16 | +0.7 | |
1,614,964 | - | Dshi_1552 | 0.37 | -1.2 | |
1,615,203 | - | Dshi_1552 | 0.56 | +0.8 |
Or see this region's nucleotide sequence