Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1516
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,577,130 | - | Dshi_1514 | 0.27 | -1.8 | |
1,577,270 | + | Dshi_1514 | 0.49 | -2.3 | |
1,577,328 | + | Dshi_1514 | 0.59 | +0.8 | |
1,577,328 | + | Dshi_1514 | 0.59 | -2.0 | |
1,577,485 | + | Dshi_1514 | 0.84 | -0.8 | |
1,577,533 | - | -0.8 | |||
1,577,587 | + | -0.6 | |||
1,578,024 | - | -2.2 | |||
1,578,714 | - | Dshi_1517 | 0.11 | -0.2 | |
1,578,758 | - | Dshi_1517 | 0.15 | +0.5 | |
1,578,806 | + | Dshi_1517 | 0.18 | +0.3 | |
1,578,848 | + | Dshi_1517 | 0.21 | +1.4 | |
1,579,114 | + | Dshi_1517 | 0.42 | -0.2 | |
1,579,457 | + | Dshi_1517 | 0.68 | -1.0 |
Or see this region's nucleotide sequence