Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1439

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,493,835	-				-1.9
1,493,857	-				-1.8
1,493,897	-				-2.1
1,493,920	-		Dshi_1438	0.11	-1.0
1,493,924	-		Dshi_1438	0.12	-1.0
1,493,995	-		Dshi_1438	0.19	+0.9
1,494,012	+		Dshi_1438	0.21	-1.6
1,494,012	-		Dshi_1438	0.21	-0.1
1,494,131	+		Dshi_1438	0.33	+0.9
1,494,139	-		Dshi_1438	0.34	+0.6
1,494,160	-		Dshi_1438	0.36	-0.9
1,494,175	+		Dshi_1438	0.38	-0.6
1,494,175	+		Dshi_1438	0.38	-0.1
1,494,175	+		Dshi_1438	0.38	+0.2
1,494,183	-		Dshi_1438	0.38	-1.2
1,494,183	-		Dshi_1438	0.38	-0.3
1,494,231	-		Dshi_1438	0.43	+0.6
1,494,243	+		Dshi_1438	0.45	-0.2
1,494,279	-		Dshi_1438	0.48	+0.6
1,494,300	-		Dshi_1438	0.51	+3.7
1,494,374	-		Dshi_1438	0.58	+2.3
1,494,381	+		Dshi_1438	0.59	-0.1
1,494,408	-		Dshi_1438	0.62	+0.2
1,494,458	-		Dshi_1438	0.67	-0.2
1,494,617	+		Dshi_1438	0.83	+0.7
1,494,640	-		Dshi_1438	0.86	+1.7
1,494,651	-		Dshi_1438	0.87	-0.8
1,494,682	-				-1.5
1,494,697	+				-0.9
1,494,748	-				-2.3
1,494,750	+				-1.0
1,494,770	+				+0.9
1,494,838	-				+1.3
1,494,852	+				-2.3
1,494,951	-		Dshi_1439	0.12	-0.5
1,494,977	+		Dshi_1439	0.14	-1.1
1,494,985	-		Dshi_1439	0.15	-0.1
1,495,020	+		Dshi_1439	0.18	+2.5
1,495,035	+		Dshi_1439	0.20	+1.2
1,495,035	+		Dshi_1439	0.20	+2.5
1,495,038	-		Dshi_1439	0.20	-1.9
1,495,048	-		Dshi_1439	0.21	+1.0
1,495,127	+		Dshi_1439	0.29	+0.3
1,495,139	-		Dshi_1439	0.30	+1.3
1,495,146	-		Dshi_1439	0.30	-1.7
1,495,242	-		Dshi_1439	0.40	-0.8
1,495,308	-		Dshi_1439	0.46	-1.1
1,495,412	+		Dshi_1439	0.56	-1.0
1,495,433	+		Dshi_1439	0.58	-1.0
1,495,438	+		Dshi_1439	0.58	+0.7
1,495,472	+		Dshi_1439	0.62	-2.3
1,495,517	-		Dshi_1439	0.66	-0.3
1,495,537	-		Dshi_1439	0.68	+0.9
1,495,537	-		Dshi_1439	0.68	+0.9
1,495,617	+		Dshi_1439	0.75	-0.3
1,495,755	-		Dshi_1439	0.89	-0.5
1,495,760	-		Dshi_1439	0.89	-0.5
1,495,799	-				-1.0
1,495,848	+				-0.1
1,495,857	+				-1.1
1,495,857	-				+0.3
1,495,865	-				-1.7
1,495,867	+				-2.4
1,495,867	+				-1.5
1,495,898	-				+0.9
1,495,902	+				-0.3
1,495,975	+				+0.9
1,496,073	-		Dshi_1440	0.12	-2.9
1,496,090	-		Dshi_1440	0.14	+0.5
1,496,148	+		Dshi_1440	0.20	-0.9
1,496,154	+		Dshi_1440	0.21	-2.0
1,496,296	+		Dshi_1440	0.36	+0.1
1,496,375	+		Dshi_1440	0.44	+1.1
1,496,375	-		Dshi_1440	0.44	+0.2
1,496,424	-		Dshi_1440	0.50	-0.1
1,496,594	+		Dshi_1440	0.68	+0.8
1,496,625	+		Dshi_1440	0.71	+2.8
1,496,703	+		Dshi_1440	0.80	-1.1
1,496,747	+		Dshi_1440	0.84	-0.2