Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1388
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,441,519 | + | Dshi_1387 | 0.77 | -2.7 | |
1,441,527 | - | Dshi_1387 | 0.77 | -3.6 | |
1,441,727 | + | +1.0 | |||
1,441,981 | + | +0.1 | |||
1,441,989 | - | -3.5 | |||
1,441,991 | + | +0.0 | |||
1,442,080 | - | -0.4 | |||
1,442,697 | + | +1.0 | |||
1,442,721 | + | +0.4 | |||
1,442,729 | - | +0.0 | |||
1,442,785 | - | -0.2 | |||
1,442,854 | - | +1.0 | |||
1,442,872 | + | +1.0 | |||
1,442,873 | + | +0.7 | |||
1,442,922 | + | -0.6 | |||
1,443,081 | - | Dshi_1389 | 0.16 | -0.4 | |
1,443,162 | - | Dshi_1389 | 0.23 | +0.0 | |
1,443,191 | - | Dshi_1389 | 0.25 | +1.0 | |
1,443,200 | + | Dshi_1389 | 0.26 | +1.3 | |
1,443,286 | + | Dshi_1389 | 0.33 | -1.0 | |
1,443,311 | + | Dshi_1389 | 0.35 | +1.0 | |
1,443,422 | + | Dshi_1389 | 0.44 | +2.0 | |
1,443,474 | + | Dshi_1389 | 0.49 | -0.5 | |
1,443,483 | - | Dshi_1389 | 0.49 | +0.0 | |
1,443,491 | + | Dshi_1389 | 0.50 | -2.4 | |
1,443,491 | + | Dshi_1389 | 0.50 | +2.0 | |
1,443,547 | - | Dshi_1389 | 0.55 | -1.3 | |
1,443,586 | - | Dshi_1389 | 0.58 | +1.0 |
Or see this region's nucleotide sequence