Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1387
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,439,615 | - | Dshi_1386 | 0.44 | +4.9 | |
1,439,626 | - | Dshi_1386 | 0.45 | +0.7 | |
1,439,801 | - | Dshi_1386 | 0.57 | +0.0 | |
1,439,895 | + | Dshi_1386 | 0.64 | -2.3 | |
1,439,902 | + | Dshi_1386 | 0.64 | +1.0 | |
1,439,918 | + | Dshi_1386 | 0.65 | -1.8 | |
1,439,951 | + | Dshi_1386 | 0.68 | -2.9 | |
1,440,035 | - | Dshi_1386 | 0.74 | +0.7 | |
1,440,038 | + | Dshi_1386 | 0.74 | +1.2 | |
1,440,333 | + | +0.8 | |||
1,440,333 | + | -2.1 | |||
1,440,341 | - | +0.8 | |||
1,440,341 | - | -2.1 | |||
1,440,368 | - | +1.0 | |||
1,440,422 | + | +1.0 | |||
1,440,430 | - | -0.5 | |||
1,440,590 | - | -1.0 | |||
1,441,519 | + | Dshi_1387 | 0.77 | -2.7 | |
1,441,527 | - | Dshi_1387 | 0.77 | -3.6 | |
1,441,727 | + | +1.0 | |||
1,441,981 | + | +0.1 | |||
1,441,989 | - | -3.5 | |||
1,441,991 | + | +0.0 | |||
1,442,080 | - | -0.4 | |||
1,442,697 | + | +1.0 | |||
1,442,721 | + | +0.4 | |||
1,442,729 | - | +0.0 | |||
1,442,785 | - | -0.2 |
Or see this region's nucleotide sequence