Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1366

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,418,130	+				+0.3
1,418,130	+				+1.5
1,418,198	+		Dshi_1365	0.10	+1.5
1,418,244	+		Dshi_1365	0.18	+1.0
1,418,252	-		Dshi_1365	0.19	-0.7
1,418,291	+		Dshi_1365	0.25	+2.6
1,418,311	-		Dshi_1365	0.28	+0.0
1,418,312	-		Dshi_1365	0.28	+0.8
1,418,537	+		Dshi_1365	0.64	-1.4
1,418,561	-		Dshi_1365	0.67	+0.2
1,418,620	-		Dshi_1365	0.77	-2.5
1,418,668	+		Dshi_1365	0.84	-1.8
1,418,727	-				-3.4
1,418,742	-				+2.0
1,418,750	+				+0.7
1,418,770	-				+1.0
1,418,823	+				-0.2
1,418,829	-				-0.2
1,418,836	+				-0.4
1,418,858	-				+3.2
1,418,887	+				+1.3
1,418,895	-				-1.1
1,418,912	-				-0.9
1,418,919	+				+0.1
1,418,919	+				+0.7
1,418,919	+				-0.1
1,418,990	+				-1.5
1,419,007	-				+0.6
1,419,007	-				+0.0
1,419,012	+				-0.4
1,419,024	+				+2.2
1,419,063	+				-3.8
1,419,111	-				+2.5
1,419,128	-		Dshi_1366	0.11	-0.2
1,419,128	-		Dshi_1366	0.11	+1.7
1,419,146	+		Dshi_1366	0.12	-0.7
1,419,165	-		Dshi_1366	0.13	-2.0
1,419,276	-		Dshi_1366	0.22	-0.4
1,419,393	-		Dshi_1366	0.31	-3.4
1,419,393	-		Dshi_1366	0.31	-1.2
1,419,393	-		Dshi_1366	0.31	-3.4
1,419,702	+		Dshi_1366	0.54	+2.2
1,419,710	-		Dshi_1366	0.55	+1.0
1,419,780	-		Dshi_1366	0.60	-0.5
1,420,033	+		Dshi_1366	0.79	+0.7
1,420,109	-		Dshi_1366	0.85	-1.3
1,420,254	-				-2.7
1,420,366	-				+0.3
1,420,574	-		Dshi_1367	0.18	+1.0
1,420,963	+		Dshi_1367	0.48	-1.3
1,420,971	-		Dshi_1367	0.49	-1.4
1,420,971	-		Dshi_1367	0.49	-1.8
1,420,991	-		Dshi_1367	0.51	-0.8
1,421,065	+		Dshi_1367	0.56	+0.4
1,421,153	+		Dshi_1367	0.63	-0.1
1,421,269	+		Dshi_1367	0.72	+0.5
1,421,309	-		Dshi_1367	0.75	-0.5