Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1354

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,405,123	+		Dshi_1353	0.36	-1.0
1,405,295	-		Dshi_1353	0.49	-2.8
1,405,295	-		Dshi_1353	0.49	+4.5
1,405,295	-		Dshi_1353	0.49	-1.5
1,405,302	+		Dshi_1353	0.50	-1.1
1,405,475	+		Dshi_1353	0.63	-0.5
1,405,509	+		Dshi_1353	0.65	+0.0
1,405,614	+		Dshi_1353	0.73	+1.4
1,405,879	+				+1.0
1,405,952	-				-3.9
1,405,966	-				-0.8
1,406,089	+				-1.3
1,406,102	+				+0.2
1,406,235	+		Dshi_1354	0.17	-2.3
1,406,240	+		Dshi_1354	0.18	-3.3
1,406,243	-		Dshi_1354	0.18	-0.9
1,406,285	-		Dshi_1354	0.21	+1.0
1,406,415	+		Dshi_1354	0.31	-3.5
1,406,587	+		Dshi_1354	0.45	-1.8
1,406,587	+		Dshi_1354	0.45	+2.0
1,406,595	-		Dshi_1354	0.46	+1.0
1,406,595	-		Dshi_1354	0.46	-0.3
1,406,648	+		Dshi_1354	0.50	+0.3
1,406,720	-		Dshi_1354	0.56	+1.0
1,406,753	+		Dshi_1354	0.59	-1.9
1,406,826	+		Dshi_1354	0.64	+2.6
1,406,827	-		Dshi_1354	0.64	-0.8
1,406,834	-		Dshi_1354	0.65	+1.1
1,407,154	+				-1.4
1,407,154	+				-3.0
1,407,357	-				+1.0
1,407,381	-				-1.5
1,407,418	-				+0.7
1,407,467	+				-2.3
1,407,472	+				-1.3
1,407,475	-				-1.8
1,407,475	-				+0.8
1,407,705	-		Dshi_1355	0.20	-3.3
1,407,711	+		Dshi_1355	0.21	-0.6
1,407,721	-		Dshi_1355	0.22	-3.3
1,407,757	+		Dshi_1355	0.25	+1.0
1,407,836	+		Dshi_1355	0.31	-2.2
1,407,892	+		Dshi_1355	0.36	-0.8
1,408,002	-		Dshi_1355	0.45	-0.4
1,408,002	-		Dshi_1355	0.45	-1.3
1,408,085	-		Dshi_1355	0.52	-0.1
1,408,120	-		Dshi_1355	0.54	-0.5
1,408,176	+		Dshi_1355	0.59	-3.6
1,408,176	+		Dshi_1355	0.59	-1.5
1,408,176	+		Dshi_1355	0.59	+1.5
1,408,181	+		Dshi_1355	0.59	-0.2
1,408,181	+		Dshi_1355	0.59	-2.6