Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1280

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,328,425	+				-3.1
1,328,515	+				-2.3
1,328,573	+				+1.0
1,328,630	-		Dshi_1279	0.17	+2.6
1,328,664	-		Dshi_1279	0.21	+3.0
1,328,715	-		Dshi_1279	0.27	+0.5
1,328,855	+		Dshi_1279	0.44	-1.0
1,328,965	+		Dshi_1279	0.58	-1.5
1,329,000	-		Dshi_1279	0.62	+1.6
1,329,021	-		Dshi_1279	0.65	-1.7
1,329,107	-		Dshi_1279	0.75	-0.1
1,329,157	-		Dshi_1279	0.82	+1.0
1,329,180	+		Dshi_1279	0.84	-1.8
1,329,330	-				+0.2
1,329,440	+				-2.7
1,329,616	+		Dshi_1280	0.23	+1.5
1,329,753	-		Dshi_1280	0.34	-2.7
1,329,763	+		Dshi_1280	0.35	-1.7
1,329,885	+		Dshi_1280	0.44	-0.2
1,329,961	+		Dshi_1280	0.50	+1.0
1,330,173	-		Dshi_1280	0.67	-0.3
1,330,238	+		Dshi_1280	0.72	-0.5
1,330,252	+		Dshi_1280	0.73	-1.1
1,330,258	-		Dshi_1280	0.74	-1.0
1,330,260	-		Dshi_1280	0.74	-2.8
1,330,318	+		Dshi_1280	0.79	-1.9
1,330,380	+		Dshi_1280	0.83	-0.9
1,330,420	+		Dshi_1280	0.87	-1.0
1,330,526	+				-0.5
1,330,527	+				+0.2
1,330,534	-				+0.6
1,330,581	-				+1.2
1,330,594	+				-1.1
1,330,650	-				+0.5
1,330,650	-				+0.6
1,330,675	-				+1.0
1,330,696	-				-0.3
1,330,700	+				+3.8
1,330,710	+				-2.5
1,330,710	+				-0.2
1,330,711	+				+3.0
1,330,718	-				+2.0
1,330,718	-				-2.3
1,330,773	-				-2.3
1,330,774	-				+2.0
1,330,833	-				+0.8
1,330,838	+				-0.2
1,330,838	+				-0.6
1,330,846	-				-0.3
1,330,851	-				-2.1
1,330,979	+				-2.0
1,330,984	+				-1.5
1,330,984	+				+1.6
1,330,992	-				-2.5
1,331,079	-		Dshi_1281	0.12	+0.7
1,331,083	-		Dshi_1281	0.12	+0.2
1,331,098	+		Dshi_1281	0.13	-0.5
1,331,207	-		Dshi_1281	0.19	+0.8
1,331,243	-		Dshi_1281	0.21	+1.6
1,331,415	-		Dshi_1281	0.31	+1.0
1,331,466	-		Dshi_1281	0.34	+0.5