Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1248

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
1,294,272	-				-1.4
1,294,330	-		Dshi_1247	0.11	-2.1
1,294,330	-		Dshi_1247	0.11	-2.5
1,294,377	-		Dshi_1247	0.16	+1.1
1,294,527	+		Dshi_1247	0.32	+0.1
1,294,551	+		Dshi_1247	0.34	+0.0
1,294,551	+		Dshi_1247	0.34	-1.8
1,294,551	+		Dshi_1247	0.34	-3.2
1,294,551	+		Dshi_1247	0.34	-1.6
1,294,551	+		Dshi_1247	0.34	+0.5
1,294,551	+		Dshi_1247	0.34	-1.0
1,294,559	-		Dshi_1247	0.35	+0.7
1,294,577	+		Dshi_1247	0.37	-0.6
1,294,605	-		Dshi_1247	0.40	-2.3
1,294,614	+		Dshi_1247	0.41	+2.6
1,294,710	+		Dshi_1247	0.52	-0.3
1,294,745	+		Dshi_1247	0.55	-0.7
1,294,750	+		Dshi_1247	0.56	+0.0
1,294,753	-		Dshi_1247	0.56	-2.2
1,294,808	-		Dshi_1247	0.62	-0.5
1,294,808	-		Dshi_1247	0.62	+0.6
1,294,870	+		Dshi_1247	0.69	-1.0
1,294,885	-		Dshi_1247	0.70	-0.9
1,294,901	-		Dshi_1247	0.72	-0.4
1,294,919	-		Dshi_1247	0.74	+1.1
1,294,942	+		Dshi_1247	0.77	-1.4
1,294,975	+		Dshi_1247	0.80	-1.0
1,294,975	+		Dshi_1247	0.80	-0.6
1,295,074	+				+0.5
1,295,082	-				+0.1
1,295,151	-				-0.9
1,295,151	-				+0.3
1,295,161	-				-3.5
1,295,170	+				-0.8
1,295,170	+				-2.1
1,295,214	+				+1.4
1,295,214	+				-2.2
1,295,222	-				-0.9
1,295,222	-				-1.9
1,295,222	-				-0.4
1,295,222	-				-4.4
1,295,237	-				+2.1
1,295,259	+				-1.6
1,295,326	-				-1.3
1,295,330	+				-0.2
1,295,384	+		Dshi_1248	0.12	-0.4
1,295,446	+		Dshi_1248	0.17	+2.2
1,295,477	+		Dshi_1248	0.19	-0.1
1,295,489	+		Dshi_1248	0.20	-1.4
1,295,585	+		Dshi_1248	0.28	+1.1
1,295,599	-		Dshi_1248	0.29	+0.1
1,295,604	-		Dshi_1248	0.30	-0.0
1,295,660	-		Dshi_1248	0.34	-0.8
1,295,814	-		Dshi_1248	0.46	+0.0
1,295,837	+		Dshi_1248	0.48	-2.7
1,295,843	+		Dshi_1248	0.49	-1.4
1,296,009	+		Dshi_1248	0.62	+0.4
1,296,015	+		Dshi_1248	0.63	-0.4
1,296,017	-		Dshi_1248	0.63	+1.1
1,296,061	-		Dshi_1248	0.66	+0.6
1,296,075	-		Dshi_1248	0.67	-1.5
1,296,080	+		Dshi_1248	0.68	+4.5
1,296,101	+		Dshi_1248	0.69	-1.0
1,296,146	+		Dshi_1248	0.73	-2.8
1,296,190	+		Dshi_1248	0.77	-0.4
1,296,217	-		Dshi_1248	0.79	+0.6
1,296,225	+		Dshi_1248	0.79	-1.7
1,296,227	+		Dshi_1248	0.80	-0.5
1,296,413	-				-1.6
1,296,431	-				-1.0
1,296,437	+				-1.7
1,296,440	-				-0.3
1,296,504	-				-0.3
1,296,542	+				-0.5
1,296,571	-				-0.2
1,296,605	+				+1.9
1,296,613	-				-0.6
1,296,771	-		Dshi_1249	0.18	-1.4
1,296,854	-		Dshi_1249	0.28	+1.1
1,296,986	-		Dshi_1249	0.45	-0.9
1,297,048	-		Dshi_1249	0.52	+0.5
1,297,134	+		Dshi_1249	0.63	+1.9
1,297,188	+		Dshi_1249	0.69	-0.0
1,297,474	-				-0.5