Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1173
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,205,532 | + | Dshi_1173 | 0.12 | -0.3 | |
1,205,575 | + | Dshi_1173 | 0.16 | +0.9 | |
1,205,825 | + | Dshi_1173 | 0.41 | -2.8 | |
1,205,878 | + | Dshi_1173 | 0.46 | +0.1 | |
1,205,881 | - | Dshi_1173 | 0.46 | +0.2 | |
1,205,886 | - | Dshi_1173 | 0.47 | +2.4 | |
1,205,886 | - | Dshi_1173 | 0.47 | +1.8 | |
1,205,923 | - | Dshi_1173 | 0.50 | -1.1 | |
1,205,923 | - | Dshi_1173 | 0.50 | -1.9 | |
1,206,080 | + | Dshi_1173 | 0.66 | -2.6 | |
1,206,094 | - | Dshi_1173 | 0.67 | -0.5 | |
1,206,146 | + | Dshi_1173 | 0.73 | -0.5 | |
1,206,158 | + | Dshi_1173 | 0.74 | -1.8 | |
1,206,258 | + | Dshi_1173 | 0.84 | -2.3 | |
1,206,266 | - | Dshi_1173 | 0.85 | -0.3 | |
1,206,590 | - | Dshi_1174 | 0.10 | +2.6 | |
1,206,630 | + | Dshi_1174 | 0.15 | +1.1 | |
1,206,726 | - | Dshi_1174 | 0.27 | -0.7 | |
1,207,005 | - | Dshi_1174 | 0.62 | +1.0 | |
1,207,061 | + | Dshi_1174 | 0.69 | -0.9 |
Or see this region's nucleotide sequence