Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0751 and Dshi_0752 are separated by 42 nucleotides Dshi_0752 and Dshi_0753 overlap by 13 nucleotides Dshi_0753 and Dshi_0754 are separated by 9 nucleotides Dshi_0754 and Dshi_0755 are separated by 41 nucleotides
Dshi_0751: Dshi_0751 - protein of unknown function DUF344 (RefSeq), at 761,970 to 762,914
_0751
Dshi_0752: Dshi_0752 - protein of unknown function DUF1007 (RefSeq), at 762,957 to 763,637
_0752
Dshi_0753: Dshi_0753 - high-affinity nickel-transporter (RefSeq), at 763,625 to 764,581
_0753
Dshi_0754: Dshi_0754 - Methyltransferase type 11 (RefSeq), at 764,591 to 765,187
_0754
Dshi_0755: Dshi_0755 - MATE efflux family protein (RefSeq), at 765,229 to 766,599
_0755
Position (kb) 763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 762.662 kb on + strand, within Dshi_0751 at 762.664 kb on - strand, within Dshi_0751 at 762.713 kb on - strand, within Dshi_0751 at 762.803 kb on - strand, within Dshi_0751 at 762.846 kb on - strand at 762.864 kb on + strand at 762.880 kb on - strand at 762.984 kb on + strand at 762.986 kb on + strand at 762.986 kb on + strand at 763.094 kb on + strand, within Dshi_0752 at 763.170 kb on - strand, within Dshi_0752 at 763.219 kb on - strand, within Dshi_0752 at 763.342 kb on + strand, within Dshi_0752 at 763.381 kb on + strand, within Dshi_0752 at 763.606 kb on + strand at 764.018 kb on + strand, within Dshi_0753 at 764.130 kb on - strand, within Dshi_0753 at 764.187 kb on + strand, within Dshi_0753 at 764.637 kb on + strand at 764.673 kb on + strand, within Dshi_0754 at 764.674 kb on - strand, within Dshi_0754 at 764.703 kb on + strand, within Dshi_0754 at 764.865 kb on - strand, within Dshi_0754 at 764.923 kb on + strand, within Dshi_0754 at 765.214 kb on + strand at 765.421 kb on + strand, within Dshi_0755 at 765.456 kb on + strand, within Dshi_0755 at 765.463 kb on + strand, within Dshi_0755
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0002 mg/ml remove 762,662 + Dshi_0751 0.73 +0.5 762,664 - Dshi_0751 0.73 +2.5 762,713 - Dshi_0751 0.79 -2.4 762,803 - Dshi_0751 0.88 -0.8 762,846 - +1.3 762,864 + +0.1 762,880 - -0.5 762,984 + +0.2 762,986 + -3.0 762,986 + +3.6 763,094 + Dshi_0752 0.20 -2.2 763,170 - Dshi_0752 0.31 +1.3 763,219 - Dshi_0752 0.38 -1.5 763,342 + Dshi_0752 0.57 -0.7 763,381 + Dshi_0752 0.62 +1.3 763,606 + -0.8 764,018 + Dshi_0753 0.41 +1.3 764,130 - Dshi_0753 0.53 -1.5 764,187 + Dshi_0753 0.59 -1.9 764,637 + +3.3 764,673 + Dshi_0754 0.14 -1.4 764,674 - Dshi_0754 0.14 +1.3 764,703 + Dshi_0754 0.19 -1.1 764,865 - Dshi_0754 0.46 +3.9 764,923 + Dshi_0754 0.56 +3.6 765,214 + -0.7 765,421 + Dshi_0755 0.14 -1.6 765,456 + Dshi_0755 0.17 +1.5 765,463 + Dshi_0755 0.17 -0.9
Or see this region's nucleotide sequence