Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0737 and Dshi_0738 are separated by 60 nucleotides Dshi_0738 and Dshi_0739 are separated by 16 nucleotides Dshi_0739 and Dshi_0740 are separated by 93 nucleotides
Dshi_0737: Dshi_0737 - heat shock protein DnaJ domain protein (RefSeq), at 743,834 to 744,517
_0737
Dshi_0738: Dshi_0738 - hypothetical protein (RefSeq), at 744,578 to 744,895
_0738
Dshi_0739: Dshi_0739 - Ppx/GppA phosphatase (RefSeq), at 744,912 to 746,432
_0739
Dshi_0740: Dshi_0740 - Polyphosphate kinase (RefSeq), at 746,526 to 748,700
_0740
Position (kb) 744
745
746
747 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 743.941 kb on - strand, within Dshi_0737 at 744.079 kb on - strand, within Dshi_0737 at 744.110 kb on + strand, within Dshi_0737 at 744.295 kb on + strand, within Dshi_0737 at 744.296 kb on + strand, within Dshi_0737 at 744.457 kb on + strand at 744.521 kb on - strand at 744.557 kb on - strand at 744.605 kb on - strand at 744.858 kb on - strand, within Dshi_0738 at 745.115 kb on - strand, within Dshi_0739 at 745.288 kb on - strand, within Dshi_0739 at 745.503 kb on + strand, within Dshi_0739 at 745.643 kb on + strand, within Dshi_0739 at 745.683 kb on - strand, within Dshi_0739 at 745.990 kb on + strand, within Dshi_0739 at 746.185 kb on - strand, within Dshi_0739 at 746.309 kb on + strand at 746.455 kb on - strand at 746.524 kb on + strand at 746.617 kb on - strand at 746.642 kb on + strand at 746.680 kb on + strand at 746.688 kb on - strand at 746.872 kb on + strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 746.939 kb on - strand, within Dshi_0740 at 747.060 kb on - strand, within Dshi_0740 at 747.152 kb on + strand, within Dshi_0740 at 747.205 kb on - strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.250 kb on + strand, within Dshi_0740 at 747.258 kb on - strand, within Dshi_0740 at 747.265 kb on + strand, within Dshi_0740 at 747.296 kb on + strand, within Dshi_0740 at 747.386 kb on - strand, within Dshi_0740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0002 mg/ml remove 743,941 - Dshi_0737 0.16 +0.3 744,079 - Dshi_0737 0.36 -2.8 744,110 + Dshi_0737 0.40 -1.4 744,295 + Dshi_0737 0.67 -1.1 744,296 + Dshi_0737 0.68 -1.4 744,457 + -0.2 744,521 - -1.1 744,557 - +1.3 744,605 - +0.3 744,858 - Dshi_0738 0.88 -0.5 745,115 - Dshi_0739 0.13 -1.2 745,288 - Dshi_0739 0.25 -1.7 745,503 + Dshi_0739 0.39 -2.7 745,643 + Dshi_0739 0.48 +3.3 745,683 - Dshi_0739 0.51 +1.3 745,990 + Dshi_0739 0.71 -0.3 746,185 - Dshi_0739 0.84 -0.4 746,309 + -0.3 746,455 - +3.6 746,524 + +1.3 746,617 - -2.1 746,642 + -2.5 746,680 + -2.3 746,688 - +0.3 746,872 + Dshi_0740 0.16 +1.3 746,939 - Dshi_0740 0.19 -0.3 746,939 - Dshi_0740 0.19 -3.1 747,060 - Dshi_0740 0.25 -0.3 747,152 + Dshi_0740 0.29 -0.3 747,205 - Dshi_0740 0.31 +1.3 747,250 + Dshi_0740 0.33 -2.9 747,250 + Dshi_0740 0.33 -2.3 747,258 - Dshi_0740 0.34 -2.5 747,265 + Dshi_0740 0.34 +0.3 747,296 + Dshi_0740 0.35 -0.3 747,386 - Dshi_0740 0.40 -3.5
Or see this region's nucleotide sequence