Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0047

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.0002 mg/ml
46,018	-				+0.6
46,050	-				-1.1
46,139	-				-2.1
46,146	+				-1.4
46,150	-				-0.3
46,172	-				-3.1
46,220	+				+3.1
46,290	-				-0.9
46,325	+				-2.4
46,348	-				-1.5
46,427	+		Dshi_0046	0.29	-1.2
46,427	-		Dshi_0046	0.29	-0.2
46,453	-		Dshi_0046	0.35	-1.1
46,460	+		Dshi_0046	0.37	-1.7
46,468	-		Dshi_0046	0.39	+2.7
46,512	-		Dshi_0046	0.51	+2.3
46,512	-		Dshi_0046	0.51	-1.1
46,550	-		Dshi_0046	0.60	-1.9
46,596	+		Dshi_0046	0.72	-2.5
46,596	+		Dshi_0046	0.72	-0.3
46,596	+		Dshi_0046	0.72	-3.1
46,596	+		Dshi_0046	0.72	+3.0
46,604	-		Dshi_0046	0.74	-0.6
46,604	-		Dshi_0046	0.74	-2.3
46,604	-		Dshi_0046	0.74	+0.2
46,604	-		Dshi_0046	0.74	-2.1
46,609	+		Dshi_0046	0.75	+1.7
46,617	-		Dshi_0046	0.77	+0.3
46,617	-		Dshi_0046	0.77	-2.1
46,641	+		Dshi_0046	0.84	+1.8
46,641	+		Dshi_0046	0.84	+3.3
46,649	-		Dshi_0046	0.86	+0.3
46,673	-				-0.5
46,673	-				+0.4
46,683	-				-2.9
46,699	+				-2.3
46,699	+				-3.1
46,714	-				-3.5
46,846	-				+0.9
46,879	+				+0.1
46,887	-				-2.2
46,887	-				-1.8
46,887	-				-4.3
46,893	-				-2.9
46,901	+				-3.1
46,924	-				+0.3
46,952	+				-0.3
46,969	+				-1.7
46,970	-				+3.6
46,980	+				+0.6
47,042	+		Dshi_0047	0.14	+2.7
47,069	-		Dshi_0047	0.20	+0.4
47,074	+		Dshi_0047	0.21	-2.1
47,131	+		Dshi_0047	0.35	-0.8
47,131	+		Dshi_0047	0.35	-1.4
47,139	-		Dshi_0047	0.37	+0.0
47,147	-		Dshi_0047	0.39	-0.3
47,153	-		Dshi_0047	0.40	-0.7
47,155	-		Dshi_0047	0.40	-0.4
47,163	-		Dshi_0047	0.42	-0.8
47,163	-		Dshi_0047	0.42	-1.1
47,164	-		Dshi_0047	0.43	-2.4
47,167	+		Dshi_0047	0.43	-0.3
47,175	-				+2.9
47,182	+		Dshi_0047	0.47	-2.2
47,221	-		Dshi_0047	0.56	+1.1
47,237	+		Dshi_0047	0.60	-1.9
47,280	+		Dshi_0047	0.70	-0.7
47,280	+		Dshi_0047	0.70	-1.5
47,280	+		Dshi_0047	0.70	-3.2
47,280	+		Dshi_0047	0.70	+0.3
47,288	-		Dshi_0047	0.72	-3.6
47,288	-		Dshi_0047	0.72	+0.3
47,298	-		Dshi_0047	0.74	-0.7
47,298	-		Dshi_0047	0.74	+2.6
47,315	-		Dshi_0047	0.78	+1.3
47,328	+		Dshi_0047	0.81	-0.1
47,328	+		Dshi_0047	0.81	-2.2
47,328	+		Dshi_0047	0.81	-1.3
47,328	+		Dshi_0047	0.81	-1.3
47,328	+		Dshi_0047	0.81	-2.3
47,328	+		Dshi_0047	0.81	-3.9
47,375	-				-0.8
47,427	+				-1.9
47,427	+				-2.7
47,427	+				+1.3
47,427	+				-0.4
47,427	+				-2.2
47,435	-				+0.6
47,435	-				-1.3
47,435	-				-1.0
47,464	+				+0.4
47,470	+				+0.9
47,497	+				-2.3
47,505	-				+2.4
47,506	-				+0.5
47,525	-				-1.7
47,525	-				-3.0
47,525	-				+0.9
47,532	+				+1.3
47,541	+				+0.5
47,559	-				-1.1
47,568	+				+0.0
47,590	+		Dshi_0048	0.11	+0.2
47,618	+		Dshi_0048	0.14	-3.9
47,628	-		Dshi_0048	0.15	-2.4
47,654	+		Dshi_0048	0.18	-0.6
47,662	-		Dshi_0048	0.19	+2.9
47,662	-		Dshi_0048	0.19	+1.3
47,721	+		Dshi_0048	0.25	-1.9
47,729	-		Dshi_0048	0.26	-0.3
47,729	-		Dshi_0048	0.26	-2.9
47,736	-		Dshi_0048	0.26	+0.8
47,786	+		Dshi_0048	0.31	-2.9
47,814	+		Dshi_0048	0.34	-0.7
47,923	-		Dshi_0048	0.46	-0.6
48,029	+		Dshi_0048	0.57	+0.3
48,047	-		Dshi_0048	0.59	+0.7
48,068	-		Dshi_0048	0.61	+1.3
48,070	+		Dshi_0048	0.61	-1.2
48,078	-		Dshi_0048	0.62	-3.2
48,101	-		Dshi_0048	0.64	-2.6
48,105	-		Dshi_0048	0.65	+2.5
48,141	+		Dshi_0048	0.68	-0.5
48,181	+		Dshi_0048	0.72	+0.3
48,225	-		Dshi_0048	0.77	-2.4
48,324	+		Dshi_0048	0.87	-0.7
48,374	-				-0.8
48,400	+				-0.7
48,402	-				-1.0