Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0037
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
38,794 | - | Dshi_0036 | 0.29 | -0.1 | |
38,846 | + | Dshi_0036 | 0.36 | +1.3 | |
39,021 | - | Dshi_0036 | 0.58 | -1.1 | |
39,083 | + | Dshi_0036 | 0.66 | -1.9 | |
39,128 | - | Dshi_0036 | 0.72 | +0.5 | |
39,162 | - | Dshi_0036 | 0.76 | -2.1 | |
39,176 | - | Dshi_0036 | 0.78 | +2.9 | |
39,295 | - | -1.1 | |||
39,317 | + | -2.1 | |||
39,325 | - | +1.3 | |||
39,341 | + | -1.3 | |||
39,371 | - | +2.2 | |||
39,410 | + | -1.7 | |||
39,424 | - | +0.3 | |||
39,482 | + | -2.5 | |||
39,520 | - | +1.3 | |||
39,520 | - | -3.0 | |||
39,525 | - | -2.6 | |||
39,528 | + | -0.7 | |||
39,637 | - | -0.7 | |||
39,642 | - | +1.8 | |||
39,644 | - | +0.7 | |||
39,649 | + | +1.3 | |||
39,669 | + | -0.3 | |||
39,669 | + | +3.4 | |||
39,692 | - | -0.3 | |||
39,694 | + | +1.3 | |||
39,706 | + | -0.8 | |||
39,786 | - | Dshi_0037 | 0.18 | +1.1 | |
39,930 | + | Dshi_0037 | 0.45 | +2.9 | |
40,212 | + | -0.7 | |||
40,212 | + | +0.7 | |||
40,327 | + | +1.1 | |||
40,370 | + | -0.3 | |||
40,713 | + | Dshi_0038 | 0.41 | +1.3 | |
40,948 | + | Dshi_0038 | 0.75 | +3.9 | |
41,122 | + | -2.1 | |||
41,124 | + | +1.7 | |||
41,172 | + | +3.0 |
Or see this region's nucleotide sequence