Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0021
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
---|---|---|---|---|---|
remove | |||||
25,040 | + | -1.1 | |||
25,118 | - | +0.4 | |||
25,240 | + | +0.4 | |||
25,552 | - | Dshi_0020 | 0.35 | +1.7 | |
25,605 | + | Dshi_0020 | 0.43 | +1.3 | |
25,658 | + | Dshi_0020 | 0.50 | -2.5 | |
25,773 | - | Dshi_0020 | 0.66 | -1.3 | |
25,809 | - | Dshi_0020 | 0.71 | -0.6 | |
25,814 | - | Dshi_0020 | 0.72 | +1.6 | |
25,987 | + | +1.7 | |||
26,214 | - | Dshi_0021 | 0.60 | +1.3 | |
26,232 | - | Dshi_0021 | 0.64 | -1.0 | |
26,360 | + | +1.3 | |||
26,457 | - | Dshi_0022 | 0.10 | +3.6 | |
26,578 | - | Dshi_0022 | 0.32 | +1.3 | |
26,578 | - | Dshi_0022 | 0.32 | -0.3 | |
26,642 | + | Dshi_0022 | 0.44 | -0.3 | |
26,665 | + | Dshi_0022 | 0.48 | -1.9 | |
26,679 | - | Dshi_0022 | 0.50 | +1.3 | |
26,864 | - | Dshi_0022 | 0.84 | +0.7 | |
26,883 | + | Dshi_0022 | 0.87 | -0.3 | |
26,928 | - | -1.9 | |||
26,995 | + | -0.3 | |||
27,219 | + | Dshi_0023 | 0.36 | -0.9 | |
27,256 | - | Dshi_0023 | 0.42 | -0.3 | |
27,315 | - | Dshi_0023 | 0.51 | +1.6 | |
27,353 | + | Dshi_0023 | 0.57 | -1.7 | |
27,374 | - | Dshi_0023 | 0.61 | +3.0 | |
27,374 | - | Dshi_0023 | 0.61 | +1.3 |
Or see this region's nucleotide sequence