Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1501 and DvMF_1502 are separated by 242 nucleotides DvMF_1502 and DvMF_1503 overlap by 4 nucleotides DvMF_1503 and DvMF_1504 are separated by 1 nucleotides DvMF_1504 and DvMF_1505 are separated by 1 nucleotides
DvMF_1501: DvMF_1501 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 1,852,305 to 1,854,350
_1501
DvMF_1502: DvMF_1502 - protein of unknown function DUF330 (RefSeq), at 1,854,593 to 1,855,336
_1502
DvMF_1503: DvMF_1503 - Mammalian cell entry related domain protein (RefSeq), at 1,855,333 to 1,856,256
_1503
DvMF_1504: DvMF_1504 - ABC transporter related (RefSeq), at 1,856,258 to 1,857,109
_1504
DvMF_1505: DvMF_1505 - protein of unknown function DUF140 (RefSeq), at 1,857,111 to 1,858,403
_1505
Position (kb)
1855
1856
1857 Strain fitness (log2 ratio)
-1
0
1 at 1854.448 kb on - strand at 1854.552 kb on + strand at 1854.552 kb on + strand at 1854.736 kb on - strand, within DvMF_1502 at 1854.758 kb on - strand, within DvMF_1502 at 1854.803 kb on + strand, within DvMF_1502 at 1855.164 kb on + strand, within DvMF_1502 at 1855.614 kb on - strand, within DvMF_1503 at 1855.678 kb on - strand, within DvMF_1503 at 1855.901 kb on - strand, within DvMF_1503 at 1855.972 kb on - strand, within DvMF_1503 at 1856.067 kb on + strand, within DvMF_1503 at 1856.067 kb on + strand, within DvMF_1503 at 1856.317 kb on + strand at 1856.325 kb on - strand at 1856.353 kb on - strand, within DvMF_1504 at 1856.521 kb on + strand, within DvMF_1504 at 1856.653 kb on - strand, within DvMF_1504 at 1856.740 kb on + strand, within DvMF_1504 at 1856.955 kb on - strand, within DvMF_1504 at 1857.245 kb on - strand, within DvMF_1505
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,854,448 - -0.6 1,854,552 + -0.1 1,854,552 + -0.1 1,854,736 - DvMF_1502 0.19 -1.1 1,854,758 - DvMF_1502 0.22 -1.2 1,854,803 + DvMF_1502 0.28 -0.5 1,855,164 + DvMF_1502 0.77 -0.5 1,855,614 - DvMF_1503 0.30 -0.3 1,855,678 - DvMF_1503 0.37 -0.1 1,855,901 - DvMF_1503 0.61 +0.1 1,855,972 - DvMF_1503 0.69 -0.4 1,856,067 + DvMF_1503 0.79 -0.6 1,856,067 + DvMF_1503 0.79 +0.0 1,856,317 + -0.3 1,856,325 - -0.2 1,856,353 - DvMF_1504 0.11 -0.2 1,856,521 + DvMF_1504 0.31 -0.9 1,856,653 - DvMF_1504 0.46 +0.4 1,856,740 + DvMF_1504 0.57 -0.4 1,856,955 - DvMF_1504 0.82 -1.5 1,857,245 - DvMF_1505 0.10 -0.6
Or see this region's nucleotide sequence