Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1414 and DvMF_1415 are separated by 154 nucleotides DvMF_1415 and DvMF_1416 are separated by 24 nucleotides DvMF_1416 and DvMF_1417 are separated by 51 nucleotides DvMF_1417 and DvMF_1418 are separated by 61 nucleotides
DvMF_1414: DvMF_1414 - Phosphoglycerate mutase (RefSeq), at 1,728,361 to 1,729,626
_1414
DvMF_1415: DvMF_1415 - hypothetical protein (RefSeq), at 1,729,781 to 1,730,092
_1415
DvMF_1416: DvMF_1416 - hypothetical protein (RefSeq), at 1,730,117 to 1,730,554
_1416
DvMF_1417: DvMF_1417 - heavy metal translocating P-type ATPase (RefSeq), at 1,730,606 to 1,733,521
_1417
DvMF_1418: DvMF_1418 - hypothetical protein (RefSeq), at 1,733,583 to 1,733,864
_1418
Position (kb)
1730
1731
1732
1733
1734 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1729.990 kb on + strand, within DvMF_1415 at 1730.094 kb on - strand at 1730.184 kb on + strand, within DvMF_1416 at 1730.499 kb on - strand, within DvMF_1416 at 1730.514 kb on + strand at 1730.698 kb on - strand at 1730.755 kb on - strand at 1731.011 kb on + strand, within DvMF_1417 at 1731.177 kb on - strand, within DvMF_1417 at 1731.185 kb on + strand, within DvMF_1417 at 1731.270 kb on - strand, within DvMF_1417 at 1731.322 kb on + strand, within DvMF_1417 at 1731.705 kb on + strand, within DvMF_1417 at 1731.744 kb on + strand, within DvMF_1417 at 1732.128 kb on + strand, within DvMF_1417 at 1732.203 kb on + strand, within DvMF_1417 at 1732.340 kb on + strand, within DvMF_1417 at 1732.340 kb on + strand, within DvMF_1417 at 1732.373 kb on + strand, within DvMF_1417 at 1732.474 kb on + strand, within DvMF_1417 at 1732.647 kb on + strand, within DvMF_1417 at 1732.655 kb on - strand, within DvMF_1417 at 1732.792 kb on - strand, within DvMF_1417 at 1732.807 kb on + strand, within DvMF_1417 at 1732.951 kb on + strand, within DvMF_1417 at 1732.975 kb on - strand, within DvMF_1417 at 1733.047 kb on - strand, within DvMF_1417 at 1733.206 kb on + strand, within DvMF_1417 at 1733.352 kb on + strand at 1733.576 kb on + strand at 1733.616 kb on - strand, within DvMF_1418 at 1733.643 kb on - strand, within DvMF_1418 at 1733.963 kb on + strand at 1734.364 kb on + strand at 1734.388 kb on - strand at 1734.474 kb on + strand at 1734.504 kb on - strand at 1734.511 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,729,990 + DvMF_1415 0.67 -0.5 1,730,094 - -0.3 1,730,184 + DvMF_1416 0.15 -0.3 1,730,499 - DvMF_1416 0.87 -0.3 1,730,514 + +0.0 1,730,698 - -0.3 1,730,755 - -0.2 1,731,011 + DvMF_1417 0.14 -0.3 1,731,177 - DvMF_1417 0.20 -0.4 1,731,185 + DvMF_1417 0.20 +0.1 1,731,270 - DvMF_1417 0.23 -0.2 1,731,322 + DvMF_1417 0.25 -0.5 1,731,705 + DvMF_1417 0.38 -0.9 1,731,744 + DvMF_1417 0.39 -0.4 1,732,128 + DvMF_1417 0.52 -0.4 1,732,203 + DvMF_1417 0.55 -0.5 1,732,340 + DvMF_1417 0.59 -0.5 1,732,340 + DvMF_1417 0.59 +0.6 1,732,373 + DvMF_1417 0.61 -0.5 1,732,474 + DvMF_1417 0.64 -0.2 1,732,647 + DvMF_1417 0.70 -0.2 1,732,655 - DvMF_1417 0.70 -0.0 1,732,792 - DvMF_1417 0.75 -0.5 1,732,807 + DvMF_1417 0.75 -0.6 1,732,951 + DvMF_1417 0.80 -0.3 1,732,975 - DvMF_1417 0.81 -0.4 1,733,047 - DvMF_1417 0.84 -0.3 1,733,206 + DvMF_1417 0.89 -0.4 1,733,352 + -0.6 1,733,576 + -1.0 1,733,616 - DvMF_1418 0.12 -0.2 1,733,643 - DvMF_1418 0.21 -0.3 1,733,963 + -3.6 1,734,364 + -0.5 1,734,388 - -0.3 1,734,474 + -0.3 1,734,504 - -0.5 1,734,511 - -0.5
Or see this region's nucleotide sequence