Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1299 and DvMF_1300 overlap by 1 nucleotides DvMF_1300 and DvMF_1301 overlap by 14 nucleotides DvMF_1301 and DvMF_1302 are separated by 541 nucleotides DvMF_1302 and DvMF_1303 overlap by 23 nucleotides
DvMF_1299: DvMF_1299 - hypothetical protein (RefSeq), at 1,589,404 to 1,589,949
_1299
DvMF_1300: DvMF_1300 - hypothetical protein (RefSeq), at 1,589,949 to 1,590,749
_1300
DvMF_1301: DvMF_1301 - baseplate assembly protein, putative (RefSeq), at 1,590,736 to 1,591,461
_1301
DvMF_1302: DvMF_1302 - baseplate assembly protein, putative (RefSeq), at 1,592,003 to 1,592,437
_1302
DvMF_1303: DvMF_1303 - baseplate assembly protein, putative (RefSeq), at 1,592,415 to 1,593,587
_1303
Position (kb)
1590
1591
1592 Strain fitness (log2 ratio)
-1
0
1 at 1589.854 kb on + strand, within DvMF_1299 at 1589.879 kb on - strand, within DvMF_1299 at 1590.058 kb on + strand, within DvMF_1300 at 1590.254 kb on + strand, within DvMF_1300 at 1590.462 kb on - strand, within DvMF_1300 at 1590.507 kb on + strand, within DvMF_1300 at 1590.509 kb on + strand, within DvMF_1300 at 1590.929 kb on + strand, within DvMF_1301 at 1591.014 kb on - strand, within DvMF_1301 at 1591.571 kb on - strand at 1592.161 kb on + strand, within DvMF_1302 at 1592.203 kb on + strand, within DvMF_1302 at 1592.261 kb on - strand, within DvMF_1302 at 1592.302 kb on - strand, within DvMF_1302 at 1592.318 kb on + strand, within DvMF_1302 at 1592.375 kb on - strand, within DvMF_1302 at 1592.453 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,589,854 + DvMF_1299 0.82 +0.2 1,589,879 - DvMF_1299 0.87 -0.1 1,590,058 + DvMF_1300 0.14 +0.0 1,590,254 + DvMF_1300 0.38 -0.5 1,590,462 - DvMF_1300 0.64 -0.1 1,590,507 + DvMF_1300 0.70 -0.1 1,590,509 + DvMF_1300 0.70 -0.3 1,590,929 + DvMF_1301 0.27 +0.3 1,591,014 - DvMF_1301 0.38 +0.2 1,591,571 - +0.3 1,592,161 + DvMF_1302 0.36 -0.1 1,592,203 + DvMF_1302 0.46 -0.2 1,592,261 - DvMF_1302 0.59 +0.0 1,592,302 - DvMF_1302 0.69 +0.6 1,592,318 + DvMF_1302 0.72 -0.0 1,592,375 - DvMF_1302 0.86 +0.1 1,592,453 - -0.4
Or see this region's nucleotide sequence