Strain Fitness in Shewanella amazonensis SB2B around Sama_3179

Experiment: LB rep2 t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB rep2 t1
3,767,467	+				+1.0
3,767,501	+				+0.2
3,767,502	-				-0.2
3,767,518	+				+0.2
3,767,519	-				-1.0
3,767,519	-				+1.0
3,767,519	-				+0.1
3,767,519	-				+1.4
3,767,548	+				+0.0
3,767,549	-				+0.2
3,767,549	-				+0.0
3,767,566	+				+0.6
3,767,567	-				-0.1
3,767,567	-				-0.7
3,767,609	+				-0.2
3,767,610	-				+1.0
3,767,610	-				-0.2
3,767,610	-				-1.2
3,767,656	+				+0.3
3,767,657	-				+0.8
3,767,657	-				+0.6
3,767,657	-				+1.7
3,767,657	-				-0.2
3,767,667	-				-0.1
3,767,721	+				-0.7
3,767,721	+				-0.6
3,767,721	+				+0.2
3,767,722	-				-0.2
3,767,722	-				-1.0
3,767,722	-				+1.4
3,767,722	-				+0.8
3,767,722	-				-1.5
3,767,735	+				+0.7
3,767,805	-				+1.2
3,767,808	+				+0.8
3,767,833	-				+0.1
3,767,918	-				+0.0
3,767,918	-				-0.8
3,767,931	-				+0.3
3,768,075	+		Sama_3178	0.20	+0.2
3,768,075	+		Sama_3178	0.20	-0.2
3,768,094	-		Sama_3178	0.25	+0.2
3,768,109	-		Sama_3178	0.30	+0.8
3,768,109	-		Sama_3178	0.30	-0.2
3,768,118	+		Sama_3178	0.33	+0.3
3,768,118	+		Sama_3178	0.33	+0.8
3,768,118	+		Sama_3178	0.33	-0.8
3,768,119	-		Sama_3178	0.33	+1.4
3,768,119	-		Sama_3178	0.33	-0.5
3,768,119	-		Sama_3178	0.33	+0.7
3,768,119	-		Sama_3178	0.33	+0.1
3,768,221	-		Sama_3178	0.64	-0.0
3,768,222	+		Sama_3178	0.64	-0.2
3,768,223	-		Sama_3178	0.65	-0.5
3,768,245	+		Sama_3178	0.71	-0.8
3,768,246	-		Sama_3178	0.72	+0.2
3,768,246	-		Sama_3178	0.72	+0.1
3,768,246	-		Sama_3178	0.72	+1.0
3,768,281	+		Sama_3178	0.82	-0.2
3,768,282	-		Sama_3178	0.82	+1.4
3,768,282	-		Sama_3178	0.82	-0.4
3,768,295	+		Sama_3178	0.86	-1.2
3,768,296	-		Sama_3178	0.87	-0.9
3,768,296	-		Sama_3178	0.87	+0.8
3,768,351	+				-0.1
3,768,369	-				+2.1
3,768,434	+				+0.1
3,768,434	+				+0.6
3,768,434	+				-0.6
3,768,434	+				+0.4
3,768,434	+				-0.5
3,768,435	-				-0.2
3,768,435	-				+0.5
3,768,435	-				-0.3
3,768,476	+				+0.1
3,768,476	+				-1.2
3,768,476	+				+0.6
3,768,476	+				-1.2
3,768,476	+				-0.0
3,768,477	-				+0.5
3,768,477	-				-0.6
3,768,477	-				+0.3
3,768,477	-				+0.6
3,768,483	-				+1.6
3,768,488	+				+1.0
3,768,488	+				+0.5
3,768,488	+				+0.5
3,768,488	+				-0.2
3,768,488	+				-1.1
3,768,488	+				+0.4
3,768,489	-				+2.4
3,768,489	-				-0.2
3,768,489	-				-0.8
3,768,489	-				+1.6
3,768,489	-				+0.2
3,768,489	-				+0.8
3,768,489	-				+0.6
3,768,521	+				-0.7
3,768,522	-				-0.9
3,768,522	-				+0.1
3,768,522	-				+1.8
3,768,529	+				-2.4
3,768,530	-				+2.6
3,768,572	+				-1.2
3,768,573	-				+0.3
3,768,573	-				+1.4
3,768,733	-		Sama_3179	0.18	+0.8
3,768,936	+		Sama_3179	0.29	-0.2
3,768,936	+		Sama_3179	0.29	+1.0
3,768,936	+		Sama_3179	0.29	+0.1
3,768,936	+		Sama_3179	0.29	+0.1
3,768,936	-		Sama_3179	0.29	+0.2
3,768,936	+		Sama_3179	0.29	+0.3
3,768,936	+		Sama_3179	0.29	-0.2
3,768,936	+		Sama_3179	0.29	+1.8
3,768,936	+		Sama_3179	0.29	+0.3
3,768,936	+		Sama_3179	0.29	+1.1
3,768,936	+		Sama_3179	0.29	+0.6
3,768,936	+		Sama_3179	0.29	-0.2
3,768,937	-		Sama_3179	0.29	+0.5
3,768,937	-		Sama_3179	0.29	-0.5
3,768,937	-		Sama_3179	0.29	-0.2
3,768,937	-		Sama_3179	0.29	+2.1
3,768,937	-		Sama_3179	0.29	-1.8
3,768,960	+		Sama_3179	0.30	-1.2
3,768,960	+		Sama_3179	0.30	+0.8
3,768,961	-		Sama_3179	0.30	+0.1
3,768,961	-		Sama_3179	0.30	-0.5
3,768,961	-		Sama_3179	0.30	-0.6
3,768,961	-		Sama_3179	0.30	+0.2
3,768,997	+		Sama_3179	0.32	-0.2
3,768,997	+		Sama_3179	0.32	-0.0
3,768,997	+		Sama_3179	0.32	-1.2
3,768,997	+		Sama_3179	0.32	+0.5
3,768,998	-		Sama_3179	0.33	+0.5
3,768,998	-		Sama_3179	0.33	-0.6
3,769,035	+		Sama_3179	0.35	+0.6
3,769,035	+		Sama_3179	0.35	+0.2
3,769,035	+		Sama_3179	0.35	-0.2
3,769,036	-		Sama_3179	0.35	+0.2
3,769,036	-		Sama_3179	0.35	+1.2
3,769,056	-		Sama_3179	0.36	+0.3
3,769,069	+		Sama_3179	0.36	-0.0
3,769,141	+		Sama_3179	0.40	-0.2
3,769,142	-		Sama_3179	0.40	+0.2
3,769,152	+		Sama_3179	0.41	+0.4
3,769,152	+		Sama_3179	0.41	+1.8
3,769,152	+		Sama_3179	0.41	-0.6
3,769,153	-		Sama_3179	0.41	-1.8
3,769,188	+		Sama_3179	0.43	+0.1
3,769,188	+		Sama_3179	0.43	-0.8
3,769,188	+		Sama_3179	0.43	+0.2
3,769,188	+		Sama_3179	0.43	+0.4
3,769,189	-		Sama_3179	0.43	-2.2
3,769,189	-		Sama_3179	0.43	-0.6
3,769,189	-		Sama_3179	0.43	-0.2
3,769,189	-		Sama_3179	0.43	+0.8
3,769,189	-		Sama_3179	0.43	+0.0
3,769,189	-		Sama_3179	0.43	-0.2
3,769,218	+		Sama_3179	0.45	+0.8
3,769,218	+		Sama_3179	0.45	+0.1
3,769,218	+		Sama_3179	0.45	+0.9
3,769,218	+		Sama_3179	0.45	+0.6
3,769,218	+		Sama_3179	0.45	+2.1
3,769,218	+		Sama_3179	0.45	+0.6
3,769,219	-		Sama_3179	0.45	-1.8
3,769,219	-		Sama_3179	0.45	+1.2
3,769,219	-		Sama_3179	0.45	+0.7
3,769,219	-		Sama_3179	0.45	+0.3
3,769,219	-		Sama_3179	0.45	+0.6
3,769,219	-		Sama_3179	0.45	+1.4
3,769,219	-		Sama_3179	0.45	+0.7
3,769,219	-		Sama_3179	0.45	-0.4
3,769,219	-		Sama_3179	0.45	+0.4
3,769,219	-		Sama_3179	0.45	+0.6
3,769,290	-		Sama_3179	0.49	-0.2
3,769,290	-		Sama_3179	0.49	+1.1
3,769,290	-		Sama_3179	0.49	-0.0
3,769,290	-		Sama_3179	0.49	+0.7
3,769,315	-		Sama_3179	0.50	-0.6
3,769,315	-		Sama_3179	0.50	-0.2
3,769,315	-		Sama_3179	0.50	+1.2
3,769,316	+		Sama_3179	0.50	-1.2
3,769,316	+		Sama_3179	0.50	+1.8
3,769,316	+		Sama_3179	0.50	-0.2
3,769,316	+		Sama_3179	0.50	+1.0
3,769,316	+		Sama_3179	0.50	+0.4
3,769,316	+		Sama_3179	0.50	-0.3
3,769,316	+		Sama_3179	0.50	+0.6
3,769,316	+		Sama_3179	0.50	+0.4
3,769,317	-		Sama_3179	0.50	+0.6
3,769,317	-		Sama_3179	0.50	-1.2
3,769,317	-		Sama_3179	0.50	+0.6
3,769,354	+		Sama_3179	0.52	+1.0
3,769,354	+		Sama_3179	0.52	-0.2
3,769,354	+		Sama_3179	0.52	+1.1
3,769,355	-		Sama_3179	0.52	-0.3
3,769,365	+		Sama_3179	0.53	+1.2
3,769,366	-		Sama_3179	0.53	-0.2
3,769,366	-		Sama_3179	0.53	-0.5
3,769,366	-		Sama_3179	0.53	+0.2
3,769,395	-		Sama_3179	0.54	-0.9
3,769,420	+		Sama_3179	0.56	-0.6
3,769,473	-		Sama_3179	0.59	-0.2
3,769,473	-		Sama_3179	0.59	-0.2
3,769,581	+		Sama_3179	0.65	-2.2
3,769,581	+		Sama_3179	0.65	-0.2
3,769,582	-		Sama_3179	0.65	+0.1
3,769,628	-		Sama_3179	0.67	+1.8
3,769,675	-		Sama_3179	0.70	+0.4
3,769,675	-		Sama_3179	0.70	+0.9
3,769,681	-		Sama_3179	0.70	+2.1
3,769,875	+		Sama_3179	0.81	-0.4
3,769,875	+		Sama_3179	0.81	+0.9
3,769,875	+		Sama_3179	0.81	+0.2
3,769,875	+		Sama_3179	0.81	+3.5
3,769,875	+		Sama_3179	0.81	-0.4
3,769,875	+		Sama_3179	0.81	+0.5
3,769,875	+		Sama_3179	0.81	-1.2
3,769,875	+		Sama_3179	0.81	+1.0
3,769,876	-		Sama_3179	0.81	-0.2
3,769,876	-		Sama_3179	0.81	-0.2
3,769,876	-		Sama_3179	0.81	+0.7
3,769,876	-		Sama_3179	0.81	+0.6
3,769,876	-		Sama_3179	0.81	+0.8
3,769,876	-		Sama_3179	0.81	-0.1
3,769,923	+		Sama_3179	0.84	-1.5
3,769,923	+		Sama_3179	0.84	+1.1
3,769,924	-		Sama_3179	0.84	+0.2
3,769,925	+		Sama_3179	0.84	+0.4
3,769,925	+		Sama_3179	0.84	-1.5
3,769,925	+		Sama_3179	0.84	+0.2
3,769,926	-		Sama_3179	0.84	+0.9
3,769,926	-		Sama_3179	0.84	+1.5
3,769,926	-		Sama_3179	0.84	+0.4
3,769,926	-		Sama_3179	0.84	-0.4
3,769,926	-		Sama_3179	0.84	-0.2
3,769,926	-		Sama_3179	0.84	-0.2
3,769,926	-		Sama_3179	0.84	-0.0
3,769,926	-		Sama_3179	0.84	-0.8
3,769,929	+		Sama_3179	0.84	-0.0
3,769,929	+		Sama_3179	0.84	+0.3
3,769,930	-		Sama_3179	0.84	-0.6
3,769,930	-		Sama_3179	0.84	+1.8
3,769,930	-		Sama_3179	0.84	+0.2
3,769,930	-		Sama_3179	0.84	+0.2
3,769,941	+		Sama_3179	0.85	+0.3
3,769,941	+		Sama_3179	0.85	+1.7
3,769,942	-		Sama_3179	0.85	-0.7
3,769,942	-		Sama_3179	0.85	-1.8
3,770,019	+		Sama_3179	0.89	-1.2
3,770,019	+		Sama_3179	0.89	-1.8
3,770,019	+		Sama_3179	0.89	+1.1
3,770,020	-		Sama_3179	0.89	+0.9
3,770,020	-		Sama_3179	0.89	-0.3
3,770,020	-		Sama_3179	0.89	+2.4
3,770,022	+		Sama_3179	0.89	+0.5
3,770,022	+		Sama_3179	0.89	+1.0
3,770,022	+		Sama_3179	0.89	+0.8
3,770,022	+		Sama_3179	0.89	+0.6
3,770,022	+		Sama_3179	0.89	+0.4
3,770,022	+		Sama_3179	0.89	+0.3
3,770,023	-		Sama_3179	0.89	+0.0
3,770,023	-		Sama_3179	0.89	+0.6
3,770,023	-		Sama_3179	0.89	+0.1
3,770,051	+				-0.4
3,770,070	+				-0.8
3,770,070	+				+0.9
3,770,071	-				+1.3
3,770,073	+				-0.2
3,770,073	+				-0.4
3,770,073	+				+0.1
3,770,073	+				+1.8
3,770,073	+				+0.8
3,770,074	-				+1.2
3,770,074	-				-1.8
3,770,074	-				-0.2
3,770,074	-				-0.1
3,770,079	+				-1.2
3,770,079	+				+0.3
3,770,079	+				+0.8
3,770,080	-				+0.7
3,770,080	-				+0.1
3,770,080	-				-0.2
3,770,080	-				+0.0
3,770,080	-				+1.0
3,770,080	-				-1.2
3,770,080	-				+0.8
3,770,085	+				-0.0
3,770,085	+				-0.2
3,770,085	+				-0.0
3,770,085	+				+0.6
3,770,085	+				-0.4
3,770,086	-				-0.4
3,770,086	-				-0.0
3,770,086	-				+2.3
3,770,086	-				-1.1
3,770,086	-				+1.1
3,770,134	+				+0.6
3,770,134	+				+1.8
3,770,134	+				-0.6
3,770,135	-				+0.9
3,770,135	-				+2.1
3,770,135	-				+0.3
3,770,135	-				-0.3
3,770,135	-				+0.9
3,770,135	-				-0.2
3,770,214	+				+0.3
3,770,214	+				+0.1
3,770,526	+		Sama_3180	0.19	+0.6
3,770,526	+		Sama_3180	0.19	-0.8
3,770,527	-		Sama_3180	0.19	-0.0
3,770,527	-		Sama_3180	0.19	-1.8
3,770,527	-		Sama_3180	0.19	+0.8
3,770,527	-		Sama_3180	0.19	+0.5
3,770,527	-		Sama_3180	0.19	-0.2
3,770,527	-		Sama_3180	0.19	-0.2
3,770,575	+		Sama_3180	0.22	+1.8
3,770,576	-		Sama_3180	0.23	+1.1
3,770,592	+		Sama_3180	0.24	+1.2
3,770,592	+		Sama_3180	0.24	+1.7
3,770,592	+		Sama_3180	0.24	+0.1
3,770,593	-		Sama_3180	0.24	-0.9
3,770,656	+		Sama_3180	0.28	-0.1
3,770,656	+		Sama_3180	0.28	+2.4
3,770,656	+		Sama_3180	0.28	-0.4
3,770,656	+		Sama_3180	0.28	+0.4
3,770,656	+		Sama_3180	0.28	+0.6
3,770,656	+		Sama_3180	0.28	+0.2
3,770,656	+		Sama_3180	0.28	+1.1
3,770,656	+		Sama_3180	0.28	-1.2
3,770,656	+		Sama_3180	0.28	+0.2
3,770,657	-		Sama_3180	0.28	+1.8
3,770,657	-		Sama_3180	0.28	-0.5
3,770,657	-		Sama_3180	0.28	-1.1
3,770,657	-		Sama_3180	0.28	-0.2
3,770,657	-		Sama_3180	0.28	-0.2
3,770,657	-		Sama_3180	0.28	+0.2
3,770,657	-		Sama_3180	0.28	+0.2
3,770,657	-		Sama_3180	0.28	-0.4
3,770,657	-		Sama_3180	0.28	-0.8
3,770,657	-		Sama_3180	0.28	-0.2
3,770,657	-		Sama_3180	0.28	-1.0
3,770,657	-		Sama_3180	0.28	-0.6
3,770,657	-		Sama_3180	0.28	+0.3
3,770,657	-		Sama_3180	0.28	+0.6
3,770,657	-		Sama_3180	0.28	+1.4
3,770,657	-		Sama_3180	0.28	-1.6
3,770,657	-		Sama_3180	0.28	+0.2
3,770,657	-		Sama_3180	0.28	+0.3
3,770,657	-		Sama_3180	0.28	+1.4
3,770,658	+		Sama_3180	0.28	+1.4
3,770,658	+		Sama_3180	0.28	+0.8
3,770,658	+		Sama_3180	0.28	-2.2
3,770,658	+		Sama_3180	0.28	+1.6
3,770,658	+		Sama_3180	0.28	+0.6
3,770,658	+		Sama_3180	0.28	+0.6
3,770,659	-		Sama_3180	0.28	+2.0
3,770,659	-		Sama_3180	0.28	-0.1
3,770,659	-		Sama_3180	0.28	+1.3
3,770,661	+		Sama_3180	0.29	+0.7
3,770,661	+		Sama_3180	0.29	+0.1
3,770,661	+		Sama_3180	0.29	+0.2
3,770,662	-		Sama_3180	0.29	+1.0
3,770,662	-		Sama_3180	0.29	+0.1
3,770,662	-		Sama_3180	0.29	+0.9
3,770,662	-		Sama_3180	0.29	+2.4
3,770,715	-		Sama_3180	0.32	-0.8
3,770,715	-		Sama_3180	0.32	+1.6
3,770,767	+		Sama_3180	0.36	-0.7
3,770,768	-		Sama_3180	0.36	-0.9
3,770,768	-		Sama_3180	0.36	+1.0
3,770,768	-		Sama_3180	0.36	+1.4
3,770,821	+		Sama_3180	0.40	+0.2
3,770,889	+		Sama_3180	0.45	+0.1
3,770,890	-		Sama_3180	0.45	+1.1
3,770,890	-		Sama_3180	0.45	+0.1
3,770,917	-		Sama_3180	0.47	+0.2
3,770,930	+		Sama_3180	0.48	+0.3
3,770,930	+		Sama_3180	0.48	+0.0
3,770,930	+		Sama_3180	0.48	-1.2
3,770,930	+		Sama_3180	0.48	-0.4
3,770,931	-		Sama_3180	0.48	-0.2
3,770,931	-		Sama_3180	0.48	-0.4
3,770,931	-		Sama_3180	0.48	+0.6
3,770,943	+		Sama_3180	0.48	+0.4
3,770,952	+		Sama_3180	0.49	+0.8
3,770,953	-		Sama_3180	0.49	+0.6
3,770,953	-		Sama_3180	0.49	+0.6
3,770,953	-		Sama_3180	0.49	+0.1
3,770,953	-		Sama_3180	0.49	+0.6
3,771,186	+		Sama_3180	0.66	+1.2
3,771,186	+		Sama_3180	0.66	+0.3
3,771,187	-		Sama_3180	0.66	+1.0
3,771,196	+		Sama_3180	0.66	+1.0
3,771,205	+		Sama_3180	0.67	-0.4
3,771,205	+		Sama_3180	0.67	+0.1