Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_4164
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
11,383 | + | Dshi_4163 | 0.39 | -0.3 | |
11,663 | - | Dshi_4163 | 0.57 | +1.3 | |
11,731 | - | Dshi_4163 | 0.61 | +0.3 | |
11,771 | - | Dshi_4163 | 0.64 | +0.3 | |
11,883 | - | Dshi_4163 | 0.71 | +1.3 | |
11,898 | - | Dshi_4163 | 0.72 | +1.3 | |
12,399 | - | -0.3 | |||
12,488 | + | Dshi_4164 | 0.18 | -0.3 | |
12,536 | - | Dshi_4164 | 0.24 | +1.3 | |
12,845 | + | Dshi_4164 | 0.63 | -1.7 | |
12,955 | - | Dshi_4164 | 0.76 | +1.8 | |
13,142 | + | +1.3 | |||
13,142 | + | +1.3 | |||
13,150 | - | +1.3 | |||
13,272 | + | Dshi_4165 | 0.14 | +0.3 | |
13,272 | + | Dshi_4165 | 0.14 | -0.7 | |
13,525 | + | Dshi_4165 | 0.39 | -0.3 | |
13,611 | + | Dshi_4165 | 0.48 | -2.4 | |
13,619 | - | Dshi_4165 | 0.49 | +1.3 | |
13,658 | - | Dshi_4165 | 0.53 | +1.3 | |
13,659 | + | Dshi_4165 | 0.53 | -0.9 | |
13,701 | + | Dshi_4165 | 0.57 | +0.1 | |
13,916 | + | Dshi_4165 | 0.78 | +3.9 |
Or see this region's nucleotide sequence