Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4105 and Dshi_4106 are separated by 226 nucleotides Dshi_4106 and Dshi_4107 are separated by 132 nucleotides
Dshi_4105: Dshi_4105 - Resolvase domain (RefSeq), at 34,155 to 35,036
_4105
Dshi_4106: Dshi_4106 - hypothetical protein (RefSeq), at 35,263 to 36,330
_4106
Dshi_4107: Dshi_4107 - hypothetical protein (RefSeq), at 36,463 to 37,227
_4107
Position (kb)
35
36
37 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 34.374 kb on - strand, within Dshi_4105 at 34.395 kb on + strand, within Dshi_4105 at 34.524 kb on - strand, within Dshi_4105 at 34.650 kb on + strand, within Dshi_4105 at 35.116 kb on - strand at 35.156 kb on + strand at 35.184 kb on + strand at 35.192 kb on - strand at 35.423 kb on + strand, within Dshi_4106 at 35.528 kb on + strand, within Dshi_4106 at 35.530 kb on + strand, within Dshi_4106 at 35.559 kb on + strand, within Dshi_4106 at 35.611 kb on - strand, within Dshi_4106 at 35.763 kb on - strand, within Dshi_4106 at 35.765 kb on + strand, within Dshi_4106 at 35.838 kb on - strand, within Dshi_4106 at 36.059 kb on + strand, within Dshi_4106 at 36.083 kb on + strand, within Dshi_4106 at 36.085 kb on + strand, within Dshi_4106 at 36.100 kb on - strand, within Dshi_4106 at 36.100 kb on - strand, within Dshi_4106 at 36.151 kb on - strand, within Dshi_4106 at 36.184 kb on + strand, within Dshi_4106 at 36.216 kb on + strand, within Dshi_4106 at 36.238 kb on + strand at 36.257 kb on + strand at 36.258 kb on + strand at 36.266 kb on - strand at 36.271 kb on + strand at 36.271 kb on + strand at 36.271 kb on + strand at 36.271 kb on + strand at 36.272 kb on - strand at 36.279 kb on - strand at 36.279 kb on - strand at 36.291 kb on - strand at 36.293 kb on + strand at 36.293 kb on + strand at 36.300 kb on - strand at 36.353 kb on - strand at 36.358 kb on + strand at 36.358 kb on + strand at 36.366 kb on - strand at 36.366 kb on - strand at 36.440 kb on - strand at 36.468 kb on - strand at 36.470 kb on + strand at 36.485 kb on - strand at 36.485 kb on - strand at 36.500 kb on - strand at 36.528 kb on + strand at 36.599 kb on - strand, within Dshi_4107 at 36.636 kb on + strand, within Dshi_4107 at 36.644 kb on - strand, within Dshi_4107 at 36.652 kb on - strand, within Dshi_4107 at 36.654 kb on - strand, within Dshi_4107 at 36.658 kb on + strand, within Dshi_4107 at 36.663 kb on + strand, within Dshi_4107 at 36.663 kb on + strand, within Dshi_4107 at 36.663 kb on + strand, within Dshi_4107 at 36.663 kb on + strand, within Dshi_4107 at 36.663 kb on + strand, within Dshi_4107 at 36.665 kb on + strand, within Dshi_4107 at 36.665 kb on + strand, within Dshi_4107 at 36.665 kb on + strand, within Dshi_4107 at 36.665 kb on + strand, within Dshi_4107 at 36.666 kb on - strand, within Dshi_4107 at 36.671 kb on + strand, within Dshi_4107 at 36.671 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.673 kb on - strand, within Dshi_4107 at 36.681 kb on - strand, within Dshi_4107 at 36.689 kb on - strand, within Dshi_4107 at 36.699 kb on + strand, within Dshi_4107 at 36.713 kb on + strand, within Dshi_4107 at 36.725 kb on + strand, within Dshi_4107 at 36.733 kb on - strand, within Dshi_4107 at 36.797 kb on + strand, within Dshi_4107 at 36.797 kb on + strand, within Dshi_4107 at 36.810 kb on - strand, within Dshi_4107 at 36.826 kb on - strand, within Dshi_4107 at 36.831 kb on - strand, within Dshi_4107 at 36.836 kb on - strand, within Dshi_4107 at 36.843 kb on - strand, within Dshi_4107 at 36.844 kb on - strand, within Dshi_4107 at 36.849 kb on - strand, within Dshi_4107 at 36.884 kb on - strand, within Dshi_4107 at 36.903 kb on - strand, within Dshi_4107 at 36.903 kb on - strand, within Dshi_4107 at 36.903 kb on - strand, within Dshi_4107 at 36.924 kb on + strand, within Dshi_4107 at 36.932 kb on - strand, within Dshi_4107 at 36.932 kb on - strand, within Dshi_4107 at 36.932 kb on - strand, within Dshi_4107 at 36.945 kb on - strand, within Dshi_4107 at 36.947 kb on - strand, within Dshi_4107 at 36.962 kb on + strand, within Dshi_4107 at 36.972 kb on + strand, within Dshi_4107 at 36.989 kb on + strand, within Dshi_4107 at 37.004 kb on + strand, within Dshi_4107 at 37.018 kb on + strand, within Dshi_4107 at 37.026 kb on - strand, within Dshi_4107 at 37.037 kb on - strand, within Dshi_4107 at 37.039 kb on + strand, within Dshi_4107 at 37.039 kb on + strand, within Dshi_4107 at 37.039 kb on + strand, within Dshi_4107 at 37.039 kb on + strand, within Dshi_4107 at 37.039 kb on + strand, within Dshi_4107 at 37.047 kb on - strand, within Dshi_4107 at 37.047 kb on - strand, within Dshi_4107 at 37.108 kb on + strand, within Dshi_4107 at 37.153 kb on + strand at 37.153 kb on + strand at 37.190 kb on - strand at 37.230 kb on + strand at 37.230 kb on + strand at 37.235 kb on + strand at 37.245 kb on + strand at 37.245 kb on + strand at 37.284 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 34,374 - Dshi_4105 0.25 -1.6 34,395 + Dshi_4105 0.27 -0.7 34,524 - Dshi_4105 0.42 +0.2 34,650 + Dshi_4105 0.56 +1.5 35,116 - +1.4 35,156 + -0.8 35,184 + +1.0 35,192 - -0.6 35,423 + Dshi_4106 0.15 +0.9 35,528 + Dshi_4106 0.25 +0.0 35,530 + Dshi_4106 0.25 +0.6 35,559 + Dshi_4106 0.28 +0.3 35,611 - Dshi_4106 0.33 +1.4 35,763 - Dshi_4106 0.47 -0.1 35,765 + Dshi_4106 0.47 -0.5 35,838 - Dshi_4106 0.54 +0.3 36,059 + Dshi_4106 0.75 +0.7 36,083 + Dshi_4106 0.77 +0.2 36,085 + Dshi_4106 0.77 +0.6 36,100 - Dshi_4106 0.78 +0.5 36,100 - Dshi_4106 0.78 +2.5 36,151 - Dshi_4106 0.83 -2.5 36,184 + Dshi_4106 0.86 +2.0 36,216 + Dshi_4106 0.89 +0.0 36,238 + -0.4 36,257 + +4.0 36,258 + +0.0 36,266 - -1.0 36,271 + -1.0 36,271 + +2.8 36,271 + -0.2 36,271 + +0.1 36,272 - -0.7 36,279 - +0.2 36,279 - -1.3 36,291 - +0.0 36,293 + +0.1 36,293 + -0.1 36,300 - +0.6 36,353 - -0.3 36,358 + -1.2 36,358 + +1.3 36,366 - +1.0 36,366 - +1.6 36,440 - -1.7 36,468 - -1.6 36,470 + +0.3 36,485 - -0.1 36,485 - -0.4 36,500 - +0.8 36,528 + +1.0 36,599 - Dshi_4107 0.18 -0.2 36,636 + Dshi_4107 0.23 -1.3 36,644 - Dshi_4107 0.24 +0.4 36,652 - Dshi_4107 0.25 -3.4 36,654 - Dshi_4107 0.25 +0.3 36,658 + Dshi_4107 0.25 +0.6 36,663 + Dshi_4107 0.26 -2.6 36,663 + Dshi_4107 0.26 -1.5 36,663 + Dshi_4107 0.26 -0.2 36,663 + Dshi_4107 0.26 +1.1 36,663 + Dshi_4107 0.26 -0.4 36,665 + Dshi_4107 0.26 -0.8 36,665 + Dshi_4107 0.26 +0.6 36,665 + Dshi_4107 0.26 +0.6 36,665 + Dshi_4107 0.26 -0.5 36,666 - Dshi_4107 0.27 -3.6 36,671 + Dshi_4107 0.27 +0.3 36,671 - Dshi_4107 0.27 -1.6 36,673 - Dshi_4107 0.27 -1.2 36,673 - Dshi_4107 0.27 +2.0 36,673 - Dshi_4107 0.27 +0.6 36,673 - Dshi_4107 0.27 +0.9 36,673 - Dshi_4107 0.27 +0.6 36,673 - Dshi_4107 0.27 +0.7 36,681 - Dshi_4107 0.28 +0.3 36,689 - Dshi_4107 0.30 -2.7 36,699 + Dshi_4107 0.31 -0.4 36,713 + Dshi_4107 0.33 -2.6 36,725 + Dshi_4107 0.34 -0.3 36,733 - Dshi_4107 0.35 -2.2 36,797 + Dshi_4107 0.44 -1.1 36,797 + Dshi_4107 0.44 -1.1 36,810 - Dshi_4107 0.45 -0.4 36,826 - Dshi_4107 0.47 -0.1 36,831 - Dshi_4107 0.48 +0.6 36,836 - Dshi_4107 0.49 +0.6 36,843 - Dshi_4107 0.50 +1.2 36,844 - Dshi_4107 0.50 -1.6 36,849 - Dshi_4107 0.50 -0.6 36,884 - Dshi_4107 0.55 -1.0 36,903 - Dshi_4107 0.58 +0.2 36,903 - Dshi_4107 0.58 +0.4 36,903 - Dshi_4107 0.58 +1.3 36,924 + Dshi_4107 0.60 -0.4 36,932 - Dshi_4107 0.61 +0.4 36,932 - Dshi_4107 0.61 -0.2 36,932 - Dshi_4107 0.61 +1.0 36,945 - Dshi_4107 0.63 -0.8 36,947 - Dshi_4107 0.63 +2.0 36,962 + Dshi_4107 0.65 -1.6 36,972 + Dshi_4107 0.67 -2.5 36,989 + Dshi_4107 0.69 -0.2 37,004 + Dshi_4107 0.71 +0.2 37,018 + Dshi_4107 0.73 -0.6 37,026 - Dshi_4107 0.74 -0.7 37,037 - Dshi_4107 0.75 -3.1 37,039 + Dshi_4107 0.75 +1.2 37,039 + Dshi_4107 0.75 +0.5 37,039 + Dshi_4107 0.75 +0.0 37,039 + Dshi_4107 0.75 +1.0 37,039 + Dshi_4107 0.75 +2.0 37,047 - Dshi_4107 0.76 +1.0 37,047 - Dshi_4107 0.76 -0.9 37,108 + Dshi_4107 0.84 +2.6 37,153 + -0.6 37,153 + -0.4 37,190 - +2.3 37,230 + -1.7 37,230 + -1.2 37,235 + -0.0 37,245 + +0.3 37,245 + -0.8 37,284 + +0.9
Or see this region's nucleotide sequence