Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3868 and Dshi_3869 are separated by 62 nucleotides Dshi_3869 and Dshi_3870 are separated by 434 nucleotides
Dshi_3868: Dshi_3868 - UDP-glucose 4-epimerase (RefSeq), at 80,804 to 81,883
_3868
Dshi_3869: Dshi_3869 - hypothetical protein (RefSeq), at 81,946 to 83,121
_3869
Dshi_3870: Dshi_3870 - peptidase S1 and S6 chymotrypsin/Hap (RefSeq), at 83,556 to 84,359
_3870
Position (kb)
81
82
83
84 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 80.948 kb on + strand, within Dshi_3868 at 81.006 kb on - strand, within Dshi_3868 at 81.029 kb on - strand, within Dshi_3868 at 81.086 kb on - strand, within Dshi_3868 at 81.101 kb on - strand, within Dshi_3868 at 81.107 kb on - strand, within Dshi_3868 at 81.166 kb on + strand, within Dshi_3868 at 81.201 kb on - strand, within Dshi_3868 at 81.270 kb on + strand, within Dshi_3868 at 81.270 kb on + strand, within Dshi_3868 at 81.319 kb on + strand, within Dshi_3868 at 81.326 kb on + strand, within Dshi_3868 at 81.327 kb on - strand, within Dshi_3868 at 81.343 kb on + strand, within Dshi_3868 at 81.430 kb on + strand, within Dshi_3868 at 81.438 kb on + strand, within Dshi_3868 at 81.475 kb on + strand, within Dshi_3868 at 81.531 kb on + strand, within Dshi_3868 at 81.534 kb on + strand, within Dshi_3868 at 81.563 kb on + strand, within Dshi_3868 at 81.563 kb on + strand, within Dshi_3868 at 81.568 kb on + strand, within Dshi_3868 at 81.576 kb on - strand, within Dshi_3868 at 81.626 kb on - strand, within Dshi_3868 at 81.695 kb on + strand, within Dshi_3868 at 81.695 kb on + strand, within Dshi_3868 at 81.698 kb on - strand, within Dshi_3868 at 81.732 kb on + strand, within Dshi_3868 at 81.740 kb on - strand, within Dshi_3868 at 81.742 kb on + strand, within Dshi_3868 at 81.750 kb on - strand, within Dshi_3868 at 81.807 kb on - strand at 81.807 kb on - strand at 81.825 kb on + strand at 81.825 kb on + strand at 81.833 kb on - strand at 81.833 kb on - strand at 81.860 kb on + strand at 81.897 kb on + strand at 81.905 kb on - strand at 81.907 kb on + strand at 81.953 kb on - strand at 81.957 kb on + strand at 81.967 kb on + strand at 82.085 kb on + strand, within Dshi_3869 at 82.162 kb on + strand, within Dshi_3869 at 82.170 kb on - strand, within Dshi_3869 at 82.238 kb on + strand, within Dshi_3869 at 82.262 kb on - strand, within Dshi_3869 at 82.269 kb on + strand, within Dshi_3869 at 82.277 kb on + strand, within Dshi_3869 at 82.287 kb on + strand, within Dshi_3869 at 82.308 kb on - strand, within Dshi_3869 at 82.365 kb on - strand, within Dshi_3869 at 82.374 kb on + strand, within Dshi_3869 at 82.382 kb on - strand, within Dshi_3869 at 82.382 kb on - strand, within Dshi_3869 at 82.409 kb on + strand, within Dshi_3869 at 82.414 kb on + strand, within Dshi_3869 at 82.521 kb on + strand, within Dshi_3869 at 82.570 kb on - strand, within Dshi_3869 at 82.589 kb on - strand, within Dshi_3869 at 82.749 kb on - strand, within Dshi_3869 at 82.810 kb on - strand, within Dshi_3869 at 82.825 kb on + strand, within Dshi_3869 at 82.833 kb on + strand, within Dshi_3869 at 82.858 kb on - strand, within Dshi_3869 at 82.890 kb on + strand, within Dshi_3869 at 82.938 kb on - strand, within Dshi_3869 at 82.969 kb on + strand, within Dshi_3869 at 83.024 kb on + strand at 83.280 kb on + strand at 83.406 kb on + strand at 83.406 kb on - strand at 83.519 kb on + strand at 83.567 kb on + strand at 83.669 kb on - strand, within Dshi_3870 at 83.693 kb on - strand, within Dshi_3870 at 83.739 kb on - strand, within Dshi_3870 at 83.746 kb on + strand, within Dshi_3870 at 83.772 kb on + strand, within Dshi_3870 at 83.772 kb on + strand, within Dshi_3870 at 83.777 kb on + strand, within Dshi_3870 at 83.780 kb on - strand, within Dshi_3870 at 83.785 kb on - strand, within Dshi_3870 at 83.827 kb on + strand, within Dshi_3870 at 83.871 kb on + strand, within Dshi_3870 at 83.893 kb on + strand, within Dshi_3870 at 83.984 kb on + strand, within Dshi_3870 at 83.985 kb on - strand, within Dshi_3870 at 84.010 kb on + strand, within Dshi_3870 at 84.068 kb on + strand, within Dshi_3870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 80,948 + Dshi_3868 0.13 -3.2 81,006 - Dshi_3868 0.19 +2.1 81,029 - Dshi_3868 0.21 +0.7 81,086 - Dshi_3868 0.26 -1.1 81,101 - Dshi_3868 0.28 +1.0 81,107 - Dshi_3868 0.28 +0.2 81,166 + Dshi_3868 0.34 +1.2 81,201 - Dshi_3868 0.37 +1.2 81,270 + Dshi_3868 0.43 -0.1 81,270 + Dshi_3868 0.43 -0.8 81,319 + Dshi_3868 0.48 +1.2 81,326 + Dshi_3868 0.48 -2.5 81,327 - Dshi_3868 0.48 +1.7 81,343 + Dshi_3868 0.50 +1.2 81,430 + Dshi_3868 0.58 -2.3 81,438 + Dshi_3868 0.59 -1.1 81,475 + Dshi_3868 0.62 +1.2 81,531 + Dshi_3868 0.67 -0.0 81,534 + Dshi_3868 0.68 -1.7 81,563 + Dshi_3868 0.70 -2.5 81,563 + Dshi_3868 0.70 +0.2 81,568 + Dshi_3868 0.71 -0.4 81,576 - Dshi_3868 0.71 -0.9 81,626 - Dshi_3868 0.76 -2.9 81,695 + Dshi_3868 0.82 -0.8 81,695 + Dshi_3868 0.82 -1.1 81,698 - Dshi_3868 0.83 +0.7 81,732 + Dshi_3868 0.86 +1.8 81,740 - Dshi_3868 0.87 -0.4 81,742 + Dshi_3868 0.87 -1.1 81,750 - Dshi_3868 0.88 -1.2 81,807 - +0.2 81,807 - +0.5 81,825 + +2.8 81,825 + -0.9 81,833 - +0.0 81,833 - -0.2 81,860 + +0.2 81,897 + -0.1 81,905 - -1.4 81,907 + -1.1 81,953 - +0.3 81,957 + -2.5 81,967 + +0.8 82,085 + Dshi_3869 0.12 -3.0 82,162 + Dshi_3869 0.18 +1.2 82,170 - Dshi_3869 0.19 +1.2 82,238 + Dshi_3869 0.25 -0.1 82,262 - Dshi_3869 0.27 +2.2 82,269 + Dshi_3869 0.27 +1.8 82,277 + Dshi_3869 0.28 +3.8 82,287 + Dshi_3869 0.29 +0.2 82,308 - Dshi_3869 0.31 +0.8 82,365 - Dshi_3869 0.36 -0.4 82,374 + Dshi_3869 0.36 +0.2 82,382 - Dshi_3869 0.37 -0.4 82,382 - Dshi_3869 0.37 +1.2 82,409 + Dshi_3869 0.39 -0.8 82,414 + Dshi_3869 0.40 -1.6 82,521 + Dshi_3869 0.49 -1.7 82,570 - Dshi_3869 0.53 +2.2 82,589 - Dshi_3869 0.55 -0.6 82,749 - Dshi_3869 0.68 +1.2 82,810 - Dshi_3869 0.73 -0.4 82,825 + Dshi_3869 0.75 +1.2 82,833 + Dshi_3869 0.75 -1.4 82,858 - Dshi_3869 0.78 -1.6 82,890 + Dshi_3869 0.80 -1.4 82,938 - Dshi_3869 0.84 -0.4 82,969 + Dshi_3869 0.87 -3.2 83,024 + +1.2 83,280 + +0.9 83,406 + -1.0 83,406 - +1.2 83,519 + -1.0 83,567 + -1.1 83,669 - Dshi_3870 0.14 -1.6 83,693 - Dshi_3870 0.17 -0.8 83,739 - Dshi_3870 0.23 +0.2 83,746 + Dshi_3870 0.24 -0.4 83,772 + Dshi_3870 0.27 -0.4 83,772 + Dshi_3870 0.27 +1.2 83,777 + Dshi_3870 0.27 -2.2 83,780 - Dshi_3870 0.28 -1.1 83,785 - Dshi_3870 0.28 -1.0 83,827 + Dshi_3870 0.34 -0.1 83,871 + Dshi_3870 0.39 -0.2 83,893 + Dshi_3870 0.42 +0.2 83,984 + Dshi_3870 0.53 -0.4 83,985 - Dshi_3870 0.53 +0.6 84,010 + Dshi_3870 0.56 +2.2 84,068 + Dshi_3870 0.64 -0.5
Or see this region's nucleotide sequence