Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3797 and Dshi_3798 overlap by 4 nucleotides Dshi_3798 and Dshi_3799 are separated by 125 nucleotides Dshi_3799 and Dshi_3800 are separated by 4 nucleotides Dshi_3800 and Dshi_3801 are separated by 58 nucleotides
Dshi_3797: Dshi_3797 - Asp/Glu racemase (RefSeq), at 5,736 to 6,419
_3797
Dshi_3798: Dshi_3798 - NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 (RefSeq), at 6,416 to 6,958
_3798
Dshi_3799: Dshi_3799 - HupE/UreJ protein (RefSeq), at 7,084 to 7,680
_3799
Dshi_3800: Dshi_3800 - hypothetical protein (RefSeq), at 7,685 to 8,299
_3800
Dshi_3801: Dshi_3801 - catalase/peroxidase HPI (RefSeq), at 8,358 to 10,535
_3801
Position (kb) 7
8 Strain fitness (log2 ratio) -2
-1
0
1
2 at 6.091 kb on - strand, within Dshi_3797 at 6.269 kb on - strand, within Dshi_3797 at 6.458 kb on + strand at 6.560 kb on + strand, within Dshi_3798 at 6.680 kb on - strand, within Dshi_3798 at 6.761 kb on - strand, within Dshi_3798 at 6.909 kb on - strand at 6.914 kb on - strand at 6.965 kb on + strand at 7.195 kb on + strand, within Dshi_3799 at 7.251 kb on + strand, within Dshi_3799 at 7.393 kb on + strand, within Dshi_3799 at 7.633 kb on - strand at 7.690 kb on - strand at 7.874 kb on - strand, within Dshi_3800 at 8.039 kb on + strand, within Dshi_3800 at 8.043 kb on + strand, within Dshi_3800 at 8.238 kb on - strand at 8.377 kb on - strand at 8.457 kb on - strand at 8.515 kb on + strand at 8.599 kb on - strand, within Dshi_3801 at 8.612 kb on + strand, within Dshi_3801
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 6,091 - Dshi_3797 0.52 +0.2 6,269 - Dshi_3797 0.78 -0.7 6,458 + -2.3 6,560 + Dshi_3798 0.27 -0.4 6,680 - Dshi_3798 0.49 +1.2 6,761 - Dshi_3798 0.64 -0.0 6,909 - -1.4 6,914 - -1.5 6,965 + -1.4 7,195 + Dshi_3799 0.19 -2.1 7,251 + Dshi_3799 0.28 +0.4 7,393 + Dshi_3799 0.52 -0.8 7,633 - +1.2 7,690 - -0.6 7,874 - Dshi_3800 0.31 +1.2 8,039 + Dshi_3800 0.58 -2.4 8,043 + Dshi_3800 0.58 +0.9 8,238 - +0.6 8,377 - -1.4 8,457 - -0.4 8,515 + -1.8 8,599 - Dshi_3801 0.11 +1.9 8,612 + Dshi_3801 0.12 -1.0
Or see this region's nucleotide sequence