Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3792 and Dshi_3793 are separated by 82 nucleotides Dshi_3793 and Dshi_3794 are separated by 3 nucleotides Dshi_3794 and Dshi_3795 overlap by 4 nucleotides
Dshi_3792: Dshi_3792 - extracellular solute-binding protein family 5 (RefSeq), at 167 to 1,822
_3792
Dshi_3793: Dshi_3793 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,905 to 2,858
_3793
Dshi_3794: Dshi_3794 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,862 to 3,749
_3794
Dshi_3795: Dshi_3795 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 3,746 to 4,741
_3795
Position (kb)
1
2
3 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 0.961 kb on - strand, within Dshi_3792 at 0.965 kb on + strand, within Dshi_3792 at 0.993 kb on + strand, within Dshi_3792 at 1.046 kb on + strand, within Dshi_3792 at 1.122 kb on + strand, within Dshi_3792 at 1.316 kb on + strand, within Dshi_3792 at 1.321 kb on + strand, within Dshi_3792 at 1.438 kb on + strand, within Dshi_3792 at 1.482 kb on + strand, within Dshi_3792 at 1.558 kb on + strand, within Dshi_3792 at 1.680 kb on - strand at 1.959 kb on - strand at 1.975 kb on - strand at 1.986 kb on - strand at 2.019 kb on - strand, within Dshi_3793 at 2.086 kb on + strand, within Dshi_3793 at 2.121 kb on + strand, within Dshi_3793 at 2.121 kb on + strand, within Dshi_3793 at 2.121 kb on + strand, within Dshi_3793 at 2.129 kb on - strand, within Dshi_3793 at 2.129 kb on - strand, within Dshi_3793 at 2.301 kb on - strand, within Dshi_3793 at 2.347 kb on + strand, within Dshi_3793 at 2.355 kb on - strand, within Dshi_3793 at 2.401 kb on + strand, within Dshi_3793 at 2.409 kb on - strand, within Dshi_3793 at 2.409 kb on - strand, within Dshi_3793 at 2.424 kb on + strand, within Dshi_3793 at 2.592 kb on + strand, within Dshi_3793 at 2.600 kb on - strand, within Dshi_3793 at 2.679 kb on - strand, within Dshi_3793 at 2.796 kb on + strand at 3.062 kb on + strand, within Dshi_3794 at 3.083 kb on + strand, within Dshi_3794 at 3.253 kb on + strand, within Dshi_3794 at 3.286 kb on + strand, within Dshi_3794 at 3.443 kb on + strand, within Dshi_3794 at 3.478 kb on + strand, within Dshi_3794 at 3.483 kb on + strand, within Dshi_3794 at 3.486 kb on - strand, within Dshi_3794 at 3.576 kb on - strand, within Dshi_3794 at 3.647 kb on + strand, within Dshi_3794 at 3.647 kb on + strand, within Dshi_3794 at 3.664 kb on + strand at 3.712 kb on + strand at 3.781 kb on - strand at 3.790 kb on - strand at 3.801 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 961 - Dshi_3792 0.48 -2.4 965 + Dshi_3792 0.48 -1.6 993 + Dshi_3792 0.50 +0.2 1,046 + Dshi_3792 0.53 -3.9 1,122 + Dshi_3792 0.58 +0.2 1,316 + Dshi_3792 0.69 -1.0 1,321 + Dshi_3792 0.70 -1.6 1,438 + Dshi_3792 0.77 -1.4 1,482 + Dshi_3792 0.79 +0.6 1,558 + Dshi_3792 0.84 -2.6 1,680 - +0.2 1,959 - +2.0 1,975 - +1.2 1,986 - +1.9 2,019 - Dshi_3793 0.12 -0.0 2,086 + Dshi_3793 0.19 -2.0 2,121 + Dshi_3793 0.23 +0.8 2,121 + Dshi_3793 0.23 -0.4 2,121 + Dshi_3793 0.23 +0.8 2,129 - Dshi_3793 0.23 +1.2 2,129 - Dshi_3793 0.23 +1.2 2,301 - Dshi_3793 0.42 -0.4 2,347 + Dshi_3793 0.46 -0.6 2,355 - Dshi_3793 0.47 -0.8 2,401 + Dshi_3793 0.52 -1.0 2,409 - Dshi_3793 0.53 -0.4 2,409 - Dshi_3793 0.53 -1.5 2,424 + Dshi_3793 0.54 +1.2 2,592 + Dshi_3793 0.72 +1.9 2,600 - Dshi_3793 0.73 -0.4 2,679 - Dshi_3793 0.81 +0.7 2,796 + +0.2 3,062 + Dshi_3794 0.23 +1.1 3,083 + Dshi_3794 0.25 -0.2 3,253 + Dshi_3794 0.44 -1.0 3,286 + Dshi_3794 0.48 -1.1 3,443 + Dshi_3794 0.65 -0.2 3,478 + Dshi_3794 0.69 -2.2 3,483 + Dshi_3794 0.70 -0.6 3,486 - Dshi_3794 0.70 -3.0 3,576 - Dshi_3794 0.80 -0.4 3,647 + Dshi_3794 0.88 +0.2 3,647 + Dshi_3794 0.88 -0.5 3,664 + -2.1 3,712 + -0.1 3,781 - -2.4 3,790 - +0.1 3,801 + +1.2
Or see this region's nucleotide sequence