Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3716 and Dshi_3717 are separated by 38 nucleotides Dshi_3717 and Dshi_3718 are separated by 53 nucleotides
Dshi_3716: Dshi_3716 - UbiD family decarboxylase (RefSeq), at 120,678 to 122,087
_3716
Dshi_3717: Dshi_3717 - aldehyde dehydrogenase (RefSeq), at 122,126 to 123,583
_3717
Dshi_3718: Dshi_3718 - transcriptional regulator, AraC family (RefSeq), at 123,637 to 124,554
_3718
Position (kb)
122
123
124 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 121.137 kb on + strand, within Dshi_3716 at 121.143 kb on - strand, within Dshi_3716 at 121.148 kb on - strand, within Dshi_3716 at 121.162 kb on + strand, within Dshi_3716 at 121.162 kb on + strand, within Dshi_3716 at 121.162 kb on + strand, within Dshi_3716 at 121.164 kb on + strand, within Dshi_3716 at 121.170 kb on - strand, within Dshi_3716 at 121.194 kb on - strand, within Dshi_3716 at 121.254 kb on + strand, within Dshi_3716 at 121.262 kb on - strand, within Dshi_3716 at 121.369 kb on + strand, within Dshi_3716 at 121.393 kb on + strand, within Dshi_3716 at 121.403 kb on + strand, within Dshi_3716 at 121.411 kb on - strand, within Dshi_3716 at 121.411 kb on - strand, within Dshi_3716 at 121.447 kb on + strand, within Dshi_3716 at 121.447 kb on + strand, within Dshi_3716 at 121.463 kb on + strand, within Dshi_3716 at 121.527 kb on + strand, within Dshi_3716 at 121.535 kb on - strand, within Dshi_3716 at 121.537 kb on - strand, within Dshi_3716 at 121.562 kb on + strand, within Dshi_3716 at 121.570 kb on - strand, within Dshi_3716 at 121.570 kb on - strand, within Dshi_3716 at 121.593 kb on - strand, within Dshi_3716 at 121.649 kb on - strand, within Dshi_3716 at 121.681 kb on + strand, within Dshi_3716 at 121.682 kb on - strand, within Dshi_3716 at 121.726 kb on - strand, within Dshi_3716 at 121.746 kb on + strand, within Dshi_3716 at 121.776 kb on + strand, within Dshi_3716 at 121.853 kb on + strand, within Dshi_3716 at 121.862 kb on + strand, within Dshi_3716 at 121.862 kb on + strand, within Dshi_3716 at 121.870 kb on - strand, within Dshi_3716 at 121.870 kb on - strand, within Dshi_3716 at 121.870 kb on - strand, within Dshi_3716 at 121.896 kb on + strand, within Dshi_3716 at 121.906 kb on + strand, within Dshi_3716 at 121.912 kb on + strand, within Dshi_3716 at 121.914 kb on - strand, within Dshi_3716 at 121.944 kb on + strand, within Dshi_3716 at 121.958 kb on + strand at 121.958 kb on + strand at 122.050 kb on + strand at 122.071 kb on + strand at 122.110 kb on + strand at 122.117 kb on - strand at 122.133 kb on + strand at 122.174 kb on - strand at 122.180 kb on - strand at 122.225 kb on - strand at 122.233 kb on + strand at 122.233 kb on + strand at 122.233 kb on + strand at 122.241 kb on - strand at 122.252 kb on + strand at 122.252 kb on + strand at 122.255 kb on - strand at 122.257 kb on + strand at 122.257 kb on + strand at 122.295 kb on + strand, within Dshi_3717 at 122.320 kb on - strand, within Dshi_3717 at 122.339 kb on + strand, within Dshi_3717 at 122.344 kb on + strand, within Dshi_3717 at 122.352 kb on - strand, within Dshi_3717 at 122.367 kb on - strand, within Dshi_3717 at 122.399 kb on - strand, within Dshi_3717 at 122.469 kb on + strand, within Dshi_3717 at 122.469 kb on + strand, within Dshi_3717 at 122.474 kb on + strand, within Dshi_3717 at 122.474 kb on + strand, within Dshi_3717 at 122.474 kb on + strand, within Dshi_3717 at 122.474 kb on + strand, within Dshi_3717 at 122.474 kb on + strand, within Dshi_3717 at 122.482 kb on - strand, within Dshi_3717 at 122.482 kb on - strand, within Dshi_3717 at 122.594 kb on + strand, within Dshi_3717 at 122.679 kb on - strand, within Dshi_3717 at 122.683 kb on + strand, within Dshi_3717 at 122.698 kb on + strand, within Dshi_3717 at 122.918 kb on + strand, within Dshi_3717 at 122.972 kb on + strand, within Dshi_3717 at 122.974 kb on + strand, within Dshi_3717 at 122.982 kb on - strand, within Dshi_3717 at 123.049 kb on + strand, within Dshi_3717 at 123.067 kb on - strand, within Dshi_3717 at 123.138 kb on - strand, within Dshi_3717 at 123.138 kb on - strand, within Dshi_3717 at 123.138 kb on - strand, within Dshi_3717 at 123.152 kb on + strand, within Dshi_3717 at 123.152 kb on + strand, within Dshi_3717 at 123.160 kb on - strand, within Dshi_3717 at 123.160 kb on - strand, within Dshi_3717 at 123.160 kb on - strand, within Dshi_3717 at 123.184 kb on - strand, within Dshi_3717 at 123.201 kb on + strand, within Dshi_3717 at 123.203 kb on + strand, within Dshi_3717 at 123.236 kb on + strand, within Dshi_3717 at 123.261 kb on + strand, within Dshi_3717 at 123.342 kb on + strand, within Dshi_3717 at 123.358 kb on - strand, within Dshi_3717 at 123.370 kb on + strand, within Dshi_3717 at 123.378 kb on - strand, within Dshi_3717 at 123.426 kb on - strand, within Dshi_3717 at 123.426 kb on - strand, within Dshi_3717 at 123.443 kb on + strand at 123.456 kb on - strand at 123.475 kb on - strand at 123.494 kb on + strand at 123.500 kb on + strand at 123.673 kb on + strand at 123.698 kb on - strand at 123.700 kb on + strand at 123.705 kb on + strand at 123.752 kb on + strand, within Dshi_3718 at 123.782 kb on + strand, within Dshi_3718 at 123.782 kb on + strand, within Dshi_3718 at 123.782 kb on + strand, within Dshi_3718 at 123.787 kb on + strand, within Dshi_3718 at 123.790 kb on - strand, within Dshi_3718 at 123.800 kb on - strand, within Dshi_3718 at 123.865 kb on + strand, within Dshi_3718 at 123.865 kb on + strand, within Dshi_3718 at 123.886 kb on - strand, within Dshi_3718 at 123.892 kb on + strand, within Dshi_3718 at 123.949 kb on - strand, within Dshi_3718 at 124.016 kb on + strand, within Dshi_3718 at 124.050 kb on + strand, within Dshi_3718 at 124.050 kb on + strand, within Dshi_3718 at 124.081 kb on - strand, within Dshi_3718 at 124.099 kb on - strand, within Dshi_3718 at 124.102 kb on + strand, within Dshi_3718 at 124.121 kb on + strand, within Dshi_3718 at 124.137 kb on - strand, within Dshi_3718 at 124.153 kb on - strand, within Dshi_3718 at 124.163 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.169 kb on + strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.177 kb on - strand, within Dshi_3718 at 124.189 kb on + strand, within Dshi_3718 at 124.189 kb on + strand, within Dshi_3718 at 124.201 kb on + strand, within Dshi_3718 at 124.218 kb on + strand, within Dshi_3718 at 124.244 kb on + strand, within Dshi_3718 at 124.282 kb on - strand, within Dshi_3718 at 124.282 kb on - strand, within Dshi_3718 at 124.286 kb on + strand, within Dshi_3718 at 124.286 kb on + strand, within Dshi_3718 at 124.291 kb on + strand, within Dshi_3718 at 124.291 kb on + strand, within Dshi_3718 at 124.292 kb on - strand, within Dshi_3718 at 124.345 kb on - strand, within Dshi_3718 at 124.345 kb on - strand, within Dshi_3718 at 124.358 kb on - strand, within Dshi_3718 at 124.365 kb on + strand, within Dshi_3718 at 124.425 kb on + strand, within Dshi_3718 at 124.434 kb on + strand, within Dshi_3718 at 124.434 kb on + strand, within Dshi_3718 at 124.439 kb on + strand, within Dshi_3718 at 124.447 kb on - strand, within Dshi_3718 at 124.494 kb on + strand at 124.510 kb on - strand at 124.529 kb on - strand at 124.549 kb on + strand at 124.557 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 121,137 + Dshi_3716 0.33 -0.5 121,143 - Dshi_3716 0.33 +0.1 121,148 - Dshi_3716 0.33 -1.3 121,162 + Dshi_3716 0.34 -2.3 121,162 + Dshi_3716 0.34 -0.3 121,162 + Dshi_3716 0.34 +0.3 121,164 + Dshi_3716 0.34 -1.3 121,170 - Dshi_3716 0.35 -4.1 121,194 - Dshi_3716 0.37 +1.7 121,254 + Dshi_3716 0.41 +0.9 121,262 - Dshi_3716 0.41 -2.3 121,369 + Dshi_3716 0.49 -0.9 121,393 + Dshi_3716 0.51 +1.9 121,403 + Dshi_3716 0.51 -1.6 121,411 - Dshi_3716 0.52 +0.3 121,411 - Dshi_3716 0.52 +3.4 121,447 + Dshi_3716 0.55 +0.9 121,447 + Dshi_3716 0.55 +0.1 121,463 + Dshi_3716 0.56 +0.1 121,527 + Dshi_3716 0.60 -3.2 121,535 - Dshi_3716 0.61 +0.3 121,537 - Dshi_3716 0.61 +0.1 121,562 + Dshi_3716 0.63 -0.7 121,570 - Dshi_3716 0.63 +0.0 121,570 - Dshi_3716 0.63 -1.1 121,593 - Dshi_3716 0.65 -0.1 121,649 - Dshi_3716 0.69 -1.1 121,681 + Dshi_3716 0.71 +0.9 121,682 - Dshi_3716 0.71 -0.7 121,726 - Dshi_3716 0.74 -1.1 121,746 + Dshi_3716 0.76 -0.8 121,776 + Dshi_3716 0.78 +3.4 121,853 + Dshi_3716 0.83 +0.5 121,862 + Dshi_3716 0.84 +4.1 121,862 + Dshi_3716 0.84 -0.3 121,870 - Dshi_3716 0.85 -3.1 121,870 - Dshi_3716 0.85 -0.5 121,870 - Dshi_3716 0.85 -0.2 121,896 + Dshi_3716 0.86 +2.3 121,906 + Dshi_3716 0.87 +0.0 121,912 + Dshi_3716 0.88 +1.9 121,914 - Dshi_3716 0.88 +1.6 121,944 + Dshi_3716 0.90 +0.6 121,958 + -0.9 121,958 + -3.8 122,050 + -0.1 122,071 + -0.7 122,110 + +0.3 122,117 - -2.3 122,133 + +1.3 122,174 - -0.3 122,180 - -0.6 122,225 - -0.7 122,233 + +0.5 122,233 + +0.3 122,233 + -0.7 122,241 - -0.2 122,252 + +2.0 122,252 + -0.6 122,255 - +2.7 122,257 + -0.5 122,257 + -0.7 122,295 + Dshi_3717 0.12 -0.3 122,320 - Dshi_3717 0.13 -0.2 122,339 + Dshi_3717 0.15 +0.3 122,344 + Dshi_3717 0.15 -0.9 122,352 - Dshi_3717 0.16 +0.8 122,367 - Dshi_3717 0.17 -0.5 122,399 - Dshi_3717 0.19 -3.7 122,469 + Dshi_3717 0.24 +0.2 122,469 + Dshi_3717 0.24 -0.3 122,474 + Dshi_3717 0.24 -0.4 122,474 + Dshi_3717 0.24 -1.1 122,474 + Dshi_3717 0.24 -2.4 122,474 + Dshi_3717 0.24 -0.3 122,474 + Dshi_3717 0.24 +0.9 122,482 - Dshi_3717 0.24 -1.2 122,482 - Dshi_3717 0.24 +0.0 122,594 + Dshi_3717 0.32 +0.3 122,679 - Dshi_3717 0.38 -2.2 122,683 + Dshi_3717 0.38 -1.3 122,698 + Dshi_3717 0.39 -1.0 122,918 + Dshi_3717 0.54 -0.4 122,972 + Dshi_3717 0.58 -1.9 122,974 + Dshi_3717 0.58 -1.1 122,982 - Dshi_3717 0.59 -1.5 123,049 + Dshi_3717 0.63 -1.0 123,067 - Dshi_3717 0.65 -0.9 123,138 - Dshi_3717 0.69 -2.5 123,138 - Dshi_3717 0.69 +1.1 123,138 - Dshi_3717 0.69 -1.5 123,152 + Dshi_3717 0.70 -2.1 123,152 + Dshi_3717 0.70 -0.5 123,160 - Dshi_3717 0.71 -0.5 123,160 - Dshi_3717 0.71 -0.6 123,160 - Dshi_3717 0.71 +0.3 123,184 - Dshi_3717 0.73 -0.3 123,201 + Dshi_3717 0.74 -1.4 123,203 + Dshi_3717 0.74 -0.7 123,236 + Dshi_3717 0.76 +0.6 123,261 + Dshi_3717 0.78 -2.5 123,342 + Dshi_3717 0.83 +0.0 123,358 - Dshi_3717 0.84 +0.3 123,370 + Dshi_3717 0.85 -1.0 123,378 - Dshi_3717 0.86 +1.0 123,426 - Dshi_3717 0.89 -2.1 123,426 - Dshi_3717 0.89 -1.9 123,443 + +0.5 123,456 - -1.3 123,475 - +0.4 123,494 + -0.3 123,500 + -3.7 123,673 + -2.5 123,698 - -4.1 123,700 + -2.6 123,705 + -0.1 123,752 + Dshi_3718 0.13 -2.1 123,782 + Dshi_3718 0.16 +0.9 123,782 + Dshi_3718 0.16 -1.5 123,782 + Dshi_3718 0.16 +0.6 123,787 + Dshi_3718 0.16 -0.3 123,790 - Dshi_3718 0.17 -0.7 123,800 - Dshi_3718 0.18 +0.5 123,865 + Dshi_3718 0.25 -0.2 123,865 + Dshi_3718 0.25 -0.9 123,886 - Dshi_3718 0.27 -0.1 123,892 + Dshi_3718 0.28 -2.3 123,949 - Dshi_3718 0.34 -0.8 124,016 + Dshi_3718 0.41 -0.5 124,050 + Dshi_3718 0.45 -1.1 124,050 + Dshi_3718 0.45 -0.1 124,081 - Dshi_3718 0.48 -0.3 124,099 - Dshi_3718 0.50 -2.9 124,102 + Dshi_3718 0.51 +1.2 124,121 + Dshi_3718 0.53 -0.1 124,137 - Dshi_3718 0.54 -2.4 124,153 - Dshi_3718 0.56 -3.5 124,163 + Dshi_3718 0.57 -0.8 124,169 + Dshi_3718 0.58 -1.6 124,169 + Dshi_3718 0.58 -0.7 124,169 + Dshi_3718 0.58 -2.1 124,169 + Dshi_3718 0.58 -0.5 124,169 + Dshi_3718 0.58 +0.3 124,169 + Dshi_3718 0.58 -1.0 124,169 + Dshi_3718 0.58 -2.2 124,169 + Dshi_3718 0.58 -0.4 124,169 + Dshi_3718 0.58 -2.1 124,169 + Dshi_3718 0.58 -2.5 124,169 + Dshi_3718 0.58 +0.3 124,169 + Dshi_3718 0.58 -1.7 124,177 - Dshi_3718 0.59 -2.3 124,177 - Dshi_3718 0.59 -2.0 124,177 - Dshi_3718 0.59 -1.7 124,177 - Dshi_3718 0.59 -1.9 124,177 - Dshi_3718 0.59 +3.7 124,177 - Dshi_3718 0.59 -0.5 124,177 - Dshi_3718 0.59 -1.5 124,189 + Dshi_3718 0.60 -4.0 124,189 + Dshi_3718 0.60 -0.3 124,201 + Dshi_3718 0.61 +0.9 124,218 + Dshi_3718 0.63 -1.1 124,244 + Dshi_3718 0.66 -0.9 124,282 - Dshi_3718 0.70 -1.1 124,282 - Dshi_3718 0.70 +0.3 124,286 + Dshi_3718 0.71 +0.0 124,286 + Dshi_3718 0.71 -0.3 124,291 + Dshi_3718 0.71 +2.6 124,291 + Dshi_3718 0.71 +1.3 124,292 - Dshi_3718 0.71 -2.3 124,345 - Dshi_3718 0.77 -2.2 124,345 - Dshi_3718 0.77 -0.8 124,358 - Dshi_3718 0.79 -1.5 124,365 + Dshi_3718 0.79 +0.3 124,425 + Dshi_3718 0.86 +0.7 124,434 + Dshi_3718 0.87 -1.9 124,434 + Dshi_3718 0.87 -1.2 124,439 + Dshi_3718 0.87 -0.1 124,447 - Dshi_3718 0.88 +2.6 124,494 + +3.3 124,510 - +0.5 124,529 - +2.3 124,549 + -2.1 124,557 + -1.5
Or see this region's nucleotide sequence