Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3657 and Dshi_3658 are separated by 563 nucleotides Dshi_3658 and Dshi_3659 are separated by 200 nucleotides Dshi_3659 and Dshi_3660 are separated by 35 nucleotides
Dshi_3657: Dshi_3657 - transposase IS3/IS911 family protein (RefSeq), at 59,693 to 60,274
_3657
Dshi_3658: Dshi_3658 - hypothetical protein (RefSeq), at 60,838 to 61,044
_3658
Dshi_3659: Dshi_3659 - hypothetical protein (RefSeq), at 61,245 to 61,547
_3659
Dshi_3660: Dshi_3660 - hypothetical protein (RefSeq), at 61,583 to 62,512
_3660
Position (kb)
60
61
62 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 59.866 kb on - strand, within Dshi_3657 at 59.871 kb on + strand, within Dshi_3657 at 59.879 kb on - strand, within Dshi_3657 at 59.888 kb on - strand, within Dshi_3657 at 60.034 kb on - strand, within Dshi_3657 at 60.044 kb on + strand, within Dshi_3657 at 60.047 kb on - strand, within Dshi_3657 at 60.085 kb on + strand, within Dshi_3657 at 60.093 kb on - strand, within Dshi_3657 at 60.093 kb on - strand, within Dshi_3657 at 60.093 kb on - strand, within Dshi_3657 at 60.217 kb on - strand at 60.231 kb on + strand at 60.233 kb on + strand at 60.250 kb on - strand at 60.300 kb on - strand at 60.308 kb on + strand at 60.311 kb on - strand at 60.384 kb on + strand at 60.392 kb on - strand at 60.392 kb on - strand at 60.409 kb on + strand at 60.432 kb on + strand at 60.449 kb on + strand at 60.465 kb on - strand at 60.502 kb on + strand at 60.566 kb on + strand at 60.573 kb on - strand at 60.573 kb on - strand at 60.574 kb on - strand at 60.673 kb on + strand at 60.734 kb on - strand at 60.738 kb on + strand at 60.921 kb on + strand, within Dshi_3658 at 60.979 kb on + strand, within Dshi_3658 at 61.006 kb on - strand, within Dshi_3658 at 61.083 kb on - strand at 61.120 kb on + strand at 61.178 kb on + strand at 61.184 kb on + strand at 61.189 kb on + strand at 61.238 kb on - strand at 61.303 kb on + strand, within Dshi_3659 at 61.326 kb on - strand, within Dshi_3659 at 61.377 kb on + strand, within Dshi_3659 at 61.385 kb on - strand, within Dshi_3659 at 61.429 kb on + strand, within Dshi_3659 at 61.474 kb on + strand, within Dshi_3659 at 61.474 kb on + strand, within Dshi_3659 at 61.475 kb on + strand, within Dshi_3659 at 61.482 kb on - strand, within Dshi_3659 at 61.490 kb on - strand, within Dshi_3659 at 61.560 kb on + strand at 61.575 kb on - strand at 61.589 kb on - strand at 61.604 kb on - strand at 61.757 kb on + strand, within Dshi_3660 at 61.862 kb on + strand, within Dshi_3660 at 61.945 kb on + strand, within Dshi_3660 at 61.964 kb on + strand, within Dshi_3660
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 59,866 - Dshi_3657 0.30 -0.1 59,871 + Dshi_3657 0.31 -0.8 59,879 - Dshi_3657 0.32 -4.4 59,888 - Dshi_3657 0.34 -0.4 60,034 - Dshi_3657 0.59 +0.6 60,044 + Dshi_3657 0.60 -4.1 60,047 - Dshi_3657 0.61 +0.2 60,085 + Dshi_3657 0.67 +1.4 60,093 - Dshi_3657 0.69 -1.1 60,093 - Dshi_3657 0.69 +0.0 60,093 - Dshi_3657 0.69 +2.3 60,217 - -0.8 60,231 + -0.7 60,233 + +0.6 60,250 - +1.1 60,300 - -0.4 60,308 + -2.7 60,311 - -0.6 60,384 + -1.0 60,392 - -0.7 60,392 - -2.1 60,409 + -0.2 60,432 + +0.3 60,449 + -0.1 60,465 - -0.1 60,502 + -1.6 60,566 + +2.3 60,573 - -4.6 60,573 - +0.6 60,574 - -1.7 60,673 + +1.7 60,734 - +0.8 60,738 + -2.4 60,921 + Dshi_3658 0.40 +0.8 60,979 + Dshi_3658 0.68 -0.7 61,006 - Dshi_3658 0.81 +1.4 61,083 - -0.5 61,120 + +0.1 61,178 + +2.9 61,184 + -2.6 61,189 + -1.7 61,238 - +0.8 61,303 + Dshi_3659 0.19 +0.3 61,326 - Dshi_3659 0.27 +0.7 61,377 + Dshi_3659 0.44 +1.2 61,385 - Dshi_3659 0.46 +0.3 61,429 + Dshi_3659 0.61 -1.7 61,474 + Dshi_3659 0.76 -0.8 61,474 + Dshi_3659 0.76 -1.2 61,475 + Dshi_3659 0.76 -2.5 61,482 - Dshi_3659 0.78 -0.5 61,490 - Dshi_3659 0.81 +0.9 61,560 + -0.4 61,575 - -0.9 61,589 - -1.6 61,604 - +0.3 61,757 + Dshi_3660 0.19 +2.3 61,862 + Dshi_3660 0.30 +1.3 61,945 + Dshi_3660 0.39 +1.8 61,964 + Dshi_3660 0.41 +0.9
Or see this region's nucleotide sequence