Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3467 and Dshi_3468 are separated by 131 nucleotides Dshi_3468 and Dshi_3469 are separated by 208 nucleotides Dshi_3469 and Dshi_3470 overlap by 4 nucleotides
Dshi_3467: Dshi_3467 - Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase (RefSeq), at 3,648,901 to 3,651,159
_3467
Dshi_3468: Dshi_3468 - peptide methionine sulfoxide reductase (RefSeq), at 3,651,291 to 3,651,971
_3468
Dshi_3469: Dshi_3469 - hypothetical protein (RefSeq), at 3,652,180 to 3,652,893
_3469
Dshi_3470: Dshi_3470 - peptidase M48 Ste24p (RefSeq), at 3,652,890 to 3,653,921
_3470
Position (kb)
3651
3652 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 3650.349 kb on + strand, within Dshi_3467 at 3650.368 kb on + strand, within Dshi_3467 at 3650.472 kb on - strand, within Dshi_3467 at 3650.490 kb on - strand, within Dshi_3467 at 3650.521 kb on + strand, within Dshi_3467 at 3650.554 kb on + strand, within Dshi_3467 at 3650.559 kb on + strand, within Dshi_3467 at 3650.621 kb on + strand, within Dshi_3467 at 3650.691 kb on - strand, within Dshi_3467 at 3650.768 kb on + strand, within Dshi_3467 at 3650.768 kb on - strand, within Dshi_3467 at 3650.929 kb on - strand, within Dshi_3467 at 3651.001 kb on + strand at 3651.017 kb on + strand at 3651.046 kb on - strand at 3651.154 kb on + strand at 3651.224 kb on + strand at 3651.285 kb on - strand at 3651.306 kb on + strand at 3651.328 kb on + strand at 3651.328 kb on + strand at 3651.382 kb on + strand, within Dshi_3468 at 3651.418 kb on - strand, within Dshi_3468 at 3651.474 kb on + strand, within Dshi_3468 at 3651.551 kb on + strand, within Dshi_3468 at 3651.577 kb on + strand, within Dshi_3468 at 3651.583 kb on - strand, within Dshi_3468 at 3651.600 kb on + strand, within Dshi_3468 at 3651.644 kb on + strand, within Dshi_3468 at 3651.682 kb on + strand, within Dshi_3468 at 3651.685 kb on - strand, within Dshi_3468 at 3651.705 kb on - strand, within Dshi_3468 at 3651.712 kb on + strand, within Dshi_3468 at 3651.715 kb on - strand, within Dshi_3468 at 3651.720 kb on - strand, within Dshi_3468 at 3651.865 kb on + strand, within Dshi_3468 at 3651.865 kb on + strand, within Dshi_3468 at 3651.865 kb on + strand, within Dshi_3468 at 3651.873 kb on - strand, within Dshi_3468 at 3651.873 kb on - strand, within Dshi_3468 at 3651.873 kb on - strand, within Dshi_3468 at 3651.873 kb on - strand, within Dshi_3468 at 3651.873 kb on - strand, within Dshi_3468 at 3651.875 kb on + strand, within Dshi_3468 at 3652.047 kb on - strand at 3652.059 kb on - strand at 3652.065 kb on - strand at 3652.082 kb on + strand at 3652.090 kb on - strand at 3652.090 kb on - strand at 3652.124 kb on + strand at 3652.137 kb on + strand at 3652.143 kb on - strand at 3652.261 kb on + strand, within Dshi_3469 at 3652.261 kb on + strand, within Dshi_3469 at 3652.261 kb on + strand, within Dshi_3469 at 3652.269 kb on - strand, within Dshi_3469 at 3652.341 kb on + strand, within Dshi_3469 at 3652.603 kb on + strand, within Dshi_3469 at 3652.611 kb on - strand, within Dshi_3469 at 3652.611 kb on - strand, within Dshi_3469 at 3652.611 kb on - strand, within Dshi_3469 at 3652.611 kb on - strand, within Dshi_3469 at 3652.611 kb on - strand, within Dshi_3469 at 3652.636 kb on + strand, within Dshi_3469 at 3652.674 kb on + strand, within Dshi_3469 at 3652.753 kb on + strand, within Dshi_3469 at 3652.754 kb on - strand, within Dshi_3469 at 3652.827 kb on + strand at 3652.876 kb on + strand at 3652.881 kb on + strand at 3652.881 kb on + strand at 3652.887 kb on + strand at 3652.889 kb on - strand at 3652.898 kb on + strand at 3652.898 kb on + strand at 3652.946 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,650,349 + Dshi_3467 0.64 -3.5 3,650,368 + Dshi_3467 0.65 +1.2 3,650,472 - Dshi_3467 0.70 -2.8 3,650,490 - Dshi_3467 0.70 +1.0 3,650,521 + Dshi_3467 0.72 +0.8 3,650,554 + Dshi_3467 0.73 +0.9 3,650,559 + Dshi_3467 0.73 -1.1 3,650,621 + Dshi_3467 0.76 +0.9 3,650,691 - Dshi_3467 0.79 +0.7 3,650,768 + Dshi_3467 0.83 -0.8 3,650,768 - Dshi_3467 0.83 -0.7 3,650,929 - Dshi_3467 0.90 -1.3 3,651,001 + -3.1 3,651,017 + -0.2 3,651,046 - +5.0 3,651,154 + -0.1 3,651,224 + -3.2 3,651,285 - +0.9 3,651,306 + -1.9 3,651,328 + +0.7 3,651,328 + -0.4 3,651,382 + Dshi_3468 0.13 -1.1 3,651,418 - Dshi_3468 0.19 +0.6 3,651,474 + Dshi_3468 0.27 +0.6 3,651,551 + Dshi_3468 0.38 -3.2 3,651,577 + Dshi_3468 0.42 -3.3 3,651,583 - Dshi_3468 0.43 -1.0 3,651,600 + Dshi_3468 0.45 +0.7 3,651,644 + Dshi_3468 0.52 -1.1 3,651,682 + Dshi_3468 0.57 +0.7 3,651,685 - Dshi_3468 0.58 -4.0 3,651,705 - Dshi_3468 0.61 +1.4 3,651,712 + Dshi_3468 0.62 +1.2 3,651,715 - Dshi_3468 0.62 +0.3 3,651,720 - Dshi_3468 0.63 +0.7 3,651,865 + Dshi_3468 0.84 +0.0 3,651,865 + Dshi_3468 0.84 +1.0 3,651,865 + Dshi_3468 0.84 +2.7 3,651,873 - Dshi_3468 0.85 +0.9 3,651,873 - Dshi_3468 0.85 -0.3 3,651,873 - Dshi_3468 0.85 -1.4 3,651,873 - Dshi_3468 0.85 +0.6 3,651,873 - Dshi_3468 0.85 -2.8 3,651,875 + Dshi_3468 0.86 -1.8 3,652,047 - +1.2 3,652,059 - +0.1 3,652,065 - -1.7 3,652,082 + +2.7 3,652,090 - +0.1 3,652,090 - -1.4 3,652,124 + -1.2 3,652,137 + -0.2 3,652,143 - +1.5 3,652,261 + Dshi_3469 0.11 -3.4 3,652,261 + Dshi_3469 0.11 +0.6 3,652,261 + Dshi_3469 0.11 -0.1 3,652,269 - Dshi_3469 0.12 +1.1 3,652,341 + Dshi_3469 0.23 -3.0 3,652,603 + Dshi_3469 0.59 -1.8 3,652,611 - Dshi_3469 0.60 -0.7 3,652,611 - Dshi_3469 0.60 -0.7 3,652,611 - Dshi_3469 0.60 -2.1 3,652,611 - Dshi_3469 0.60 +0.5 3,652,611 - Dshi_3469 0.60 +2.2 3,652,636 + Dshi_3469 0.64 -0.5 3,652,674 + Dshi_3469 0.69 -1.3 3,652,753 + Dshi_3469 0.80 +0.4 3,652,754 - Dshi_3469 0.80 -0.7 3,652,827 + +1.6 3,652,876 + +1.2 3,652,881 + -1.0 3,652,881 + -3.1 3,652,887 + -3.3 3,652,889 - +1.3 3,652,898 + -1.5 3,652,898 + +0.2 3,652,946 + +2.5
Or see this region's nucleotide sequence