Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3278 and Dshi_3279 are separated by 268 nucleotides Dshi_3279 and Dshi_3280 overlap by 1 nucleotides Dshi_3280 and Dshi_3281 are separated by 139 nucleotides
Dshi_3278: Dshi_3278 - ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq), at 3,443,243 to 3,443,800
_3278
Dshi_3279: Dshi_3279 - Glutathione S-transferase domain (RefSeq), at 3,444,069 to 3,444,680
_3279
Dshi_3280: Dshi_3280 - hypothetical protein (RefSeq), at 3,444,680 to 3,444,967
_3280
Dshi_3281: Dshi_3281 - Endonuclease/exonuclease/phosphatase (RefSeq), at 3,445,107 to 3,448,478
_3281
Position (kb)
3444
3445 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3443.981 kb on + strand at 3444.044 kb on - strand at 3444.151 kb on + strand, within Dshi_3279 at 3444.159 kb on - strand, within Dshi_3279 at 3444.288 kb on - strand, within Dshi_3279 at 3444.389 kb on + strand, within Dshi_3279 at 3444.397 kb on - strand, within Dshi_3279 at 3444.516 kb on + strand, within Dshi_3279 at 3444.585 kb on + strand, within Dshi_3279 at 3444.712 kb on - strand, within Dshi_3280 at 3444.778 kb on - strand, within Dshi_3280 at 3444.804 kb on + strand, within Dshi_3280 at 3444.814 kb on - strand, within Dshi_3280 at 3444.845 kb on - strand, within Dshi_3280 at 3444.934 kb on + strand, within Dshi_3280 at 3445.018 kb on - strand at 3445.022 kb on + strand at 3445.220 kb on + strand at 3445.228 kb on - strand at 3445.228 kb on - strand at 3445.229 kb on + strand at 3445.247 kb on - strand at 3445.343 kb on + strand at 3445.351 kb on + strand at 3445.359 kb on - strand at 3445.382 kb on + strand at 3445.390 kb on - strand at 3445.597 kb on + strand, within Dshi_3281 at 3445.607 kb on - strand, within Dshi_3281 at 3445.619 kb on + strand, within Dshi_3281 at 3445.620 kb on - strand, within Dshi_3281 at 3445.635 kb on - strand, within Dshi_3281 at 3445.646 kb on + strand, within Dshi_3281 at 3445.686 kb on + strand, within Dshi_3281 at 3445.687 kb on + strand, within Dshi_3281 at 3445.687 kb on + strand, within Dshi_3281 at 3445.695 kb on - strand, within Dshi_3281 at 3445.695 kb on - strand, within Dshi_3281 at 3445.733 kb on - strand, within Dshi_3281 at 3445.742 kb on + strand, within Dshi_3281 at 3445.823 kb on + strand, within Dshi_3281 at 3445.828 kb on + strand, within Dshi_3281 at 3445.941 kb on + strand, within Dshi_3281
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,443,981 + -1.3 3,444,044 - -1.5 3,444,151 + Dshi_3279 0.13 -0.8 3,444,159 - Dshi_3279 0.15 -1.3 3,444,288 - Dshi_3279 0.36 +0.4 3,444,389 + Dshi_3279 0.52 +0.8 3,444,397 - Dshi_3279 0.54 -1.1 3,444,516 + Dshi_3279 0.73 -1.8 3,444,585 + Dshi_3279 0.84 -2.0 3,444,712 - Dshi_3280 0.11 -0.5 3,444,778 - Dshi_3280 0.34 -0.2 3,444,804 + Dshi_3280 0.43 -0.3 3,444,814 - Dshi_3280 0.47 -2.0 3,444,845 - Dshi_3280 0.57 -1.2 3,444,934 + Dshi_3280 0.88 +0.1 3,445,018 - -1.2 3,445,022 + -2.4 3,445,220 + -0.8 3,445,228 - -0.9 3,445,228 - -1.8 3,445,229 + -2.1 3,445,247 - +0.6 3,445,343 + +0.4 3,445,351 + -1.2 3,445,359 - +0.8 3,445,382 + +0.6 3,445,390 - +1.0 3,445,597 + Dshi_3281 0.15 -0.8 3,445,607 - Dshi_3281 0.15 -0.6 3,445,619 + Dshi_3281 0.15 -0.3 3,445,620 - Dshi_3281 0.15 -3.5 3,445,635 - Dshi_3281 0.16 +2.4 3,445,646 + Dshi_3281 0.16 -1.8 3,445,686 + Dshi_3281 0.17 +0.9 3,445,687 + Dshi_3281 0.17 +0.8 3,445,687 + Dshi_3281 0.17 -0.9 3,445,695 - Dshi_3281 0.17 +0.7 3,445,695 - Dshi_3281 0.17 +0.1 3,445,733 - Dshi_3281 0.19 -2.8 3,445,742 + Dshi_3281 0.19 -2.0 3,445,823 + Dshi_3281 0.21 -2.9 3,445,828 + Dshi_3281 0.21 -1.2 3,445,941 + Dshi_3281 0.25 -0.7
Or see this region's nucleotide sequence