Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3271 and Dshi_3272 overlap by 4 nucleotides Dshi_3272 and Dshi_3273 are separated by 285 nucleotides
Dshi_3271: Dshi_3271 - protein of unknown function DUF59 (RefSeq), at 3,435,991 to 3,437,064
_3271
Dshi_3272: Dshi_3272 - hypothetical protein (RefSeq), at 3,437,061 to 3,437,258
_3272
Dshi_3273: Dshi_3273 - lipid A biosynthesis acyltransferase (RefSeq), at 3,437,544 to 3,438,491
_3273
Position (kb)
3437
3438 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3436.154 kb on + strand, within Dshi_3271 at 3436.216 kb on - strand, within Dshi_3271 at 3436.281 kb on - strand, within Dshi_3271 at 3436.467 kb on + strand, within Dshi_3271 at 3436.472 kb on + strand, within Dshi_3271 at 3436.506 kb on + strand, within Dshi_3271 at 3436.529 kb on - strand, within Dshi_3271 at 3436.570 kb on + strand, within Dshi_3271 at 3436.682 kb on - strand, within Dshi_3271 at 3436.898 kb on + strand, within Dshi_3271 at 3436.924 kb on - strand, within Dshi_3271 at 3437.033 kb on - strand at 3437.064 kb on + strand at 3437.153 kb on - strand, within Dshi_3272 at 3437.153 kb on - strand, within Dshi_3272 at 3437.168 kb on - strand, within Dshi_3272 at 3437.203 kb on - strand, within Dshi_3272 at 3437.301 kb on - strand at 3437.301 kb on - strand at 3437.421 kb on + strand at 3437.428 kb on + strand at 3437.429 kb on + strand at 3437.571 kb on - strand at 3437.630 kb on + strand at 3437.663 kb on - strand, within Dshi_3273 at 3437.684 kb on - strand, within Dshi_3273 at 3437.738 kb on - strand, within Dshi_3273 at 3437.766 kb on - strand, within Dshi_3273 at 3437.825 kb on + strand, within Dshi_3273 at 3437.839 kb on + strand, within Dshi_3273 at 3437.883 kb on - strand, within Dshi_3273 at 3437.899 kb on - strand, within Dshi_3273 at 3437.923 kb on + strand, within Dshi_3273 at 3437.993 kb on - strand, within Dshi_3273 at 3438.228 kb on + strand, within Dshi_3273
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,436,154 + Dshi_3271 0.15 -1.2 3,436,216 - Dshi_3271 0.21 -2.9 3,436,281 - Dshi_3271 0.27 -2.0 3,436,467 + Dshi_3271 0.44 -3.4 3,436,472 + Dshi_3271 0.45 -0.8 3,436,506 + Dshi_3271 0.48 +2.8 3,436,529 - Dshi_3271 0.50 +2.4 3,436,570 + Dshi_3271 0.54 -2.0 3,436,682 - Dshi_3271 0.64 -0.2 3,436,898 + Dshi_3271 0.84 -0.9 3,436,924 - Dshi_3271 0.87 -0.2 3,437,033 - -1.1 3,437,064 + -1.9 3,437,153 - Dshi_3272 0.46 +0.8 3,437,153 - Dshi_3272 0.46 -3.2 3,437,168 - Dshi_3272 0.54 +1.8 3,437,203 - Dshi_3272 0.72 -0.7 3,437,301 - +3.1 3,437,301 - +0.8 3,437,421 + +1.7 3,437,428 + +1.8 3,437,429 + -0.9 3,437,571 - +0.1 3,437,630 + -0.4 3,437,663 - Dshi_3273 0.13 -0.9 3,437,684 - Dshi_3273 0.15 +4.1 3,437,738 - Dshi_3273 0.20 -3.6 3,437,766 - Dshi_3273 0.23 -1.2 3,437,825 + Dshi_3273 0.30 -0.9 3,437,839 + Dshi_3273 0.31 -0.8 3,437,883 - Dshi_3273 0.36 +1.8 3,437,899 - Dshi_3273 0.37 +1.4 3,437,923 + Dshi_3273 0.40 -2.0 3,437,993 - Dshi_3273 0.47 -1.5 3,438,228 + Dshi_3273 0.72 -2.0
Or see this region's nucleotide sequence