Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3225 and Dshi_3226 are separated by 39 nucleotides Dshi_3226 and Dshi_3227 are separated by 19 nucleotides Dshi_3227 and Dshi_R0050 are separated by 136 nucleotides
Dshi_3225: Dshi_3225 - hypothetical protein (RefSeq), at 3,394,234 to 3,395,673
_3225
Dshi_3226: Dshi_3226 - hypothetical protein (RefSeq), at 3,395,713 to 3,395,988
_3226
Dshi_3227: Dshi_3227 - hypothetical protein (RefSeq), at 3,396,008 to 3,396,778
_3227
Dshi_R0050: Dshi_R0050 - tRNA-Lys (RefSeq), at 3,396,915 to 3,396,990
_R0050
Position (kb)
3395
3396 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3394.721 kb on - strand, within Dshi_3225 at 3394.736 kb on - strand, within Dshi_3225 at 3394.908 kb on + strand, within Dshi_3225 at 3394.915 kb on - strand, within Dshi_3225 at 3394.915 kb on - strand, within Dshi_3225 at 3394.915 kb on - strand, within Dshi_3225 at 3394.951 kb on + strand, within Dshi_3225 at 3394.972 kb on - strand, within Dshi_3225 at 3395.054 kb on + strand, within Dshi_3225 at 3395.082 kb on - strand, within Dshi_3225 at 3395.156 kb on + strand, within Dshi_3225 at 3395.204 kb on + strand, within Dshi_3225 at 3395.208 kb on - strand, within Dshi_3225 at 3395.250 kb on - strand, within Dshi_3225 at 3395.374 kb on - strand, within Dshi_3225 at 3395.379 kb on - strand, within Dshi_3225 at 3395.389 kb on - strand, within Dshi_3225 at 3395.424 kb on - strand, within Dshi_3225 at 3395.519 kb on + strand, within Dshi_3225 at 3395.519 kb on + strand, within Dshi_3225 at 3395.527 kb on - strand, within Dshi_3225 at 3395.577 kb on + strand at 3395.731 kb on + strand at 3395.733 kb on + strand at 3395.749 kb on + strand, within Dshi_3226 at 3395.752 kb on - strand, within Dshi_3226 at 3395.776 kb on + strand, within Dshi_3226 at 3395.784 kb on + strand, within Dshi_3226 at 3395.793 kb on + strand, within Dshi_3226 at 3395.801 kb on - strand, within Dshi_3226 at 3395.853 kb on + strand, within Dshi_3226 at 3395.977 kb on - strand at 3395.998 kb on - strand at 3396.038 kb on - strand at 3396.062 kb on - strand at 3396.131 kb on + strand, within Dshi_3227 at 3396.178 kb on + strand, within Dshi_3227 at 3396.282 kb on - strand, within Dshi_3227 at 3396.366 kb on + strand, within Dshi_3227 at 3396.457 kb on + strand, within Dshi_3227 at 3396.463 kb on + strand, within Dshi_3227 at 3396.491 kb on + strand, within Dshi_3227 at 3396.530 kb on + strand, within Dshi_3227 at 3396.542 kb on + strand, within Dshi_3227 at 3396.609 kb on - strand, within Dshi_3227 at 3396.692 kb on + strand, within Dshi_3227 at 3396.700 kb on - strand, within Dshi_3227 at 3396.703 kb on + strand at 3396.771 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,394,721 - Dshi_3225 0.34 +0.9 3,394,736 - Dshi_3225 0.35 -0.2 3,394,908 + Dshi_3225 0.47 -2.7 3,394,915 - Dshi_3225 0.47 -0.7 3,394,915 - Dshi_3225 0.47 +0.5 3,394,915 - Dshi_3225 0.47 -1.4 3,394,951 + Dshi_3225 0.50 -1.1 3,394,972 - Dshi_3225 0.51 +2.2 3,395,054 + Dshi_3225 0.57 -1.9 3,395,082 - Dshi_3225 0.59 +0.9 3,395,156 + Dshi_3225 0.64 -0.1 3,395,204 + Dshi_3225 0.67 -0.1 3,395,208 - Dshi_3225 0.68 -0.5 3,395,250 - Dshi_3225 0.71 +4.5 3,395,374 - Dshi_3225 0.79 +2.2 3,395,379 - Dshi_3225 0.80 -2.5 3,395,389 - Dshi_3225 0.80 -1.1 3,395,424 - Dshi_3225 0.83 +0.9 3,395,519 + Dshi_3225 0.89 -0.5 3,395,519 + Dshi_3225 0.89 +1.7 3,395,527 - Dshi_3225 0.90 +3.1 3,395,577 + -0.4 3,395,731 + +1.2 3,395,733 + -1.1 3,395,749 + Dshi_3226 0.13 +0.0 3,395,752 - Dshi_3226 0.14 +0.7 3,395,776 + Dshi_3226 0.23 +1.6 3,395,784 + Dshi_3226 0.26 -0.1 3,395,793 + Dshi_3226 0.29 -1.4 3,395,801 - Dshi_3226 0.32 -0.5 3,395,853 + Dshi_3226 0.51 -0.3 3,395,977 - -1.9 3,395,998 - +3.2 3,396,038 - -1.2 3,396,062 - +0.8 3,396,131 + Dshi_3227 0.16 +0.3 3,396,178 + Dshi_3227 0.22 +0.3 3,396,282 - Dshi_3227 0.36 -1.7 3,396,366 + Dshi_3227 0.46 +0.4 3,396,457 + Dshi_3227 0.58 +0.9 3,396,463 + Dshi_3227 0.59 -1.7 3,396,491 + Dshi_3227 0.63 -2.2 3,396,530 + Dshi_3227 0.68 -1.7 3,396,542 + Dshi_3227 0.69 +0.3 3,396,609 - Dshi_3227 0.78 -0.5 3,396,692 + Dshi_3227 0.89 -1.8 3,396,700 - Dshi_3227 0.90 -0.6 3,396,703 + +0.9 3,396,771 - -1.4
Or see this region's nucleotide sequence