Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3144 and Dshi_3145 are separated by 81 nucleotides Dshi_3145 and Dshi_3146 are separated by 79 nucleotides Dshi_3146 and Dshi_3147 are separated by 34 nucleotides Dshi_3147 and Dshi_3148 are separated by 2 nucleotides
Dshi_3144: Dshi_3144 - extracellular solute-binding protein family 1 (RefSeq), at 3,310,655 to 3,312,037
_3144
Dshi_3145: Dshi_3145 - HpcH/HpaI aldolase (RefSeq), at 3,312,119 to 3,312,880
_3145
Dshi_3146: Dshi_3146 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit (RefSeq), at 3,312,960 to 3,313,922
_3146
Dshi_3147: Dshi_3147 - protein of unknown function DUF306 Meta and HslJ (RefSeq), at 3,313,957 to 3,314,697
_3147
Dshi_3148: Dshi_3148 - hypothetical protein (RefSeq), at 3,314,700 to 3,315,176
_3148
Position (kb)
3312
3313
3314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3312.109 kb on - strand at 3312.117 kb on + strand at 3312.123 kb on - strand at 3312.148 kb on + strand at 3312.329 kb on - strand, within Dshi_3145 at 3312.374 kb on - strand, within Dshi_3145 at 3312.404 kb on - strand, within Dshi_3145 at 3312.419 kb on - strand, within Dshi_3145 at 3312.421 kb on + strand, within Dshi_3145 at 3312.493 kb on + strand, within Dshi_3145 at 3312.501 kb on - strand, within Dshi_3145 at 3312.501 kb on - strand, within Dshi_3145 at 3312.501 kb on - strand, within Dshi_3145 at 3312.501 kb on - strand, within Dshi_3145 at 3312.512 kb on - strand, within Dshi_3145 at 3312.513 kb on + strand, within Dshi_3145 at 3312.531 kb on - strand, within Dshi_3145 at 3312.575 kb on - strand, within Dshi_3145 at 3312.580 kb on + strand, within Dshi_3145 at 3312.739 kb on + strand, within Dshi_3145 at 3312.759 kb on - strand, within Dshi_3145 at 3312.802 kb on - strand, within Dshi_3145 at 3312.803 kb on - strand, within Dshi_3145 at 3312.803 kb on - strand, within Dshi_3145 at 3312.808 kb on - strand at 3312.877 kb on - strand at 3312.906 kb on - strand at 3314.091 kb on + strand, within Dshi_3147 at 3314.091 kb on - strand, within Dshi_3147 at 3314.228 kb on + strand, within Dshi_3147 at 3314.250 kb on + strand, within Dshi_3147 at 3314.341 kb on - strand, within Dshi_3147 at 3314.418 kb on - strand, within Dshi_3147
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,312,109 - +2.5 3,312,117 + -3.1 3,312,123 - -0.0 3,312,148 + -2.1 3,312,329 - Dshi_3145 0.28 -0.9 3,312,374 - Dshi_3145 0.33 -0.5 3,312,404 - Dshi_3145 0.37 -0.8 3,312,419 - Dshi_3145 0.39 -0.7 3,312,421 + Dshi_3145 0.40 +3.3 3,312,493 + Dshi_3145 0.49 +0.1 3,312,501 - Dshi_3145 0.50 +0.0 3,312,501 - Dshi_3145 0.50 -1.2 3,312,501 - Dshi_3145 0.50 -1.4 3,312,501 - Dshi_3145 0.50 -0.8 3,312,512 - Dshi_3145 0.52 -0.4 3,312,513 + Dshi_3145 0.52 +2.5 3,312,531 - Dshi_3145 0.54 +2.9 3,312,575 - Dshi_3145 0.60 -2.1 3,312,580 + Dshi_3145 0.60 +2.9 3,312,739 + Dshi_3145 0.81 +2.9 3,312,759 - Dshi_3145 0.84 -0.7 3,312,802 - Dshi_3145 0.90 -0.8 3,312,803 - Dshi_3145 0.90 -0.2 3,312,803 - Dshi_3145 0.90 +0.1 3,312,808 - +2.2 3,312,877 - -1.7 3,312,906 - -2.2 3,314,091 + Dshi_3147 0.18 +0.2 3,314,091 - Dshi_3147 0.18 +0.9 3,314,228 + Dshi_3147 0.37 +0.5 3,314,250 + Dshi_3147 0.40 -1.4 3,314,341 - Dshi_3147 0.52 -0.5 3,314,418 - Dshi_3147 0.62 +0.9
Or see this region's nucleotide sequence