Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3111 and Dshi_3112 are separated by 77 nucleotides Dshi_3112 and Dshi_3113 are separated by 68 nucleotides
Dshi_3111: Dshi_3111 - sulfatase (RefSeq), at 3,277,491 to 3,279,092
_3111
Dshi_3112: Dshi_3112 - nonspecific acid phosphatase (RefSeq), at 3,279,170 to 3,280,126
_3112
Dshi_3113: Dshi_3113 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 3,280,195 to 3,281,160
_3113
Position (kb)
3279
3280
3281 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3278.314 kb on + strand, within Dshi_3111 at 3278.376 kb on + strand, within Dshi_3111 at 3278.423 kb on + strand, within Dshi_3111 at 3278.431 kb on - strand, within Dshi_3111 at 3278.450 kb on + strand, within Dshi_3111 at 3278.458 kb on - strand, within Dshi_3111 at 3278.482 kb on - strand, within Dshi_3111 at 3278.497 kb on + strand, within Dshi_3111 at 3278.507 kb on + strand, within Dshi_3111 at 3278.556 kb on + strand, within Dshi_3111 at 3278.566 kb on - strand, within Dshi_3111 at 3278.681 kb on - strand, within Dshi_3111 at 3278.836 kb on + strand, within Dshi_3111 at 3278.844 kb on - strand, within Dshi_3111 at 3278.848 kb on - strand, within Dshi_3111 at 3279.189 kb on - strand at 3279.280 kb on - strand, within Dshi_3112 at 3279.319 kb on + strand, within Dshi_3112 at 3279.337 kb on + strand, within Dshi_3112 at 3279.372 kb on - strand, within Dshi_3112 at 3279.372 kb on - strand, within Dshi_3112 at 3279.372 kb on - strand, within Dshi_3112 at 3279.424 kb on - strand, within Dshi_3112 at 3279.441 kb on + strand, within Dshi_3112 at 3279.449 kb on - strand, within Dshi_3112 at 3279.449 kb on - strand, within Dshi_3112 at 3279.449 kb on - strand, within Dshi_3112 at 3279.451 kb on + strand, within Dshi_3112 at 3279.463 kb on + strand, within Dshi_3112 at 3279.545 kb on - strand, within Dshi_3112 at 3279.600 kb on + strand, within Dshi_3112 at 3279.697 kb on - strand, within Dshi_3112 at 3279.770 kb on - strand, within Dshi_3112 at 3279.772 kb on + strand, within Dshi_3112 at 3279.780 kb on - strand, within Dshi_3112 at 3279.781 kb on - strand, within Dshi_3112 at 3279.791 kb on - strand, within Dshi_3112 at 3279.893 kb on + strand, within Dshi_3112 at 3279.971 kb on - strand, within Dshi_3112 at 3279.995 kb on + strand, within Dshi_3112 at 3280.075 kb on + strand at 3280.134 kb on - strand at 3280.177 kb on + strand at 3280.237 kb on + strand at 3280.319 kb on - strand, within Dshi_3113 at 3280.332 kb on + strand, within Dshi_3113 at 3280.341 kb on - strand, within Dshi_3113 at 3280.356 kb on - strand, within Dshi_3113 at 3280.361 kb on - strand, within Dshi_3113 at 3280.367 kb on + strand, within Dshi_3113 at 3280.438 kb on - strand, within Dshi_3113 at 3280.491 kb on - strand, within Dshi_3113 at 3280.634 kb on + strand, within Dshi_3113 at 3280.869 kb on - strand, within Dshi_3113 at 3280.872 kb on + strand, within Dshi_3113 at 3280.885 kb on - strand, within Dshi_3113 at 3281.003 kb on + strand, within Dshi_3113 at 3281.003 kb on + strand, within Dshi_3113 at 3281.003 kb on + strand, within Dshi_3113 at 3281.020 kb on - strand, within Dshi_3113 at 3281.106 kb on - strand at 3281.112 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 3,278,314 + Dshi_3111 0.51 -2.2 3,278,376 + Dshi_3111 0.55 -0.6 3,278,423 + Dshi_3111 0.58 -0.7 3,278,431 - Dshi_3111 0.59 +0.7 3,278,450 + Dshi_3111 0.60 -2.1 3,278,458 - Dshi_3111 0.60 +0.2 3,278,482 - Dshi_3111 0.62 +0.7 3,278,497 + Dshi_3111 0.63 -3.6 3,278,507 + Dshi_3111 0.63 +1.3 3,278,556 + Dshi_3111 0.66 +1.5 3,278,566 - Dshi_3111 0.67 -0.4 3,278,681 - Dshi_3111 0.74 +3.5 3,278,836 + Dshi_3111 0.84 +0.7 3,278,844 - Dshi_3111 0.84 -1.7 3,278,848 - Dshi_3111 0.85 -1.9 3,279,189 - +1.4 3,279,280 - Dshi_3112 0.11 +0.4 3,279,319 + Dshi_3112 0.16 -2.4 3,279,337 + Dshi_3112 0.17 +1.9 3,279,372 - Dshi_3112 0.21 -1.9 3,279,372 - Dshi_3112 0.21 +3.4 3,279,372 - Dshi_3112 0.21 +0.1 3,279,424 - Dshi_3112 0.27 +0.5 3,279,441 + Dshi_3112 0.28 -0.7 3,279,449 - Dshi_3112 0.29 -3.5 3,279,449 - Dshi_3112 0.29 -2.2 3,279,449 - Dshi_3112 0.29 -0.2 3,279,451 + Dshi_3112 0.29 -0.8 3,279,463 + Dshi_3112 0.31 -0.4 3,279,545 - Dshi_3112 0.39 -0.2 3,279,600 + Dshi_3112 0.45 +0.8 3,279,697 - Dshi_3112 0.55 +0.4 3,279,770 - Dshi_3112 0.63 -0.2 3,279,772 + Dshi_3112 0.63 -0.3 3,279,780 - Dshi_3112 0.64 +0.9 3,279,781 - Dshi_3112 0.64 +0.8 3,279,791 - Dshi_3112 0.65 -0.3 3,279,893 + Dshi_3112 0.76 +0.7 3,279,971 - Dshi_3112 0.84 -2.8 3,279,995 + Dshi_3112 0.86 -2.6 3,280,075 + -1.2 3,280,134 - +1.1 3,280,177 + -1.6 3,280,237 + +1.8 3,280,319 - Dshi_3113 0.13 -3.4 3,280,332 + Dshi_3113 0.14 -2.3 3,280,341 - Dshi_3113 0.15 -3.3 3,280,356 - Dshi_3113 0.17 +0.8 3,280,361 - Dshi_3113 0.17 -0.1 3,280,367 + Dshi_3113 0.18 +0.8 3,280,438 - Dshi_3113 0.25 +0.1 3,280,491 - Dshi_3113 0.31 -1.0 3,280,634 + Dshi_3113 0.45 -0.1 3,280,869 - Dshi_3113 0.70 -1.9 3,280,872 + Dshi_3113 0.70 +1.6 3,280,885 - Dshi_3113 0.71 -0.2 3,281,003 + Dshi_3113 0.84 +0.2 3,281,003 + Dshi_3113 0.84 -1.9 3,281,003 + Dshi_3113 0.84 +0.1 3,281,020 - Dshi_3113 0.85 +1.5 3,281,106 - -0.9 3,281,112 + -1.6
Or see this region's nucleotide sequence