Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2771 and Dshi_2772 are separated by 146 nucleotides Dshi_2772 and Dshi_2773 overlap by 4 nucleotides Dshi_2773 and Dshi_2774 overlap by 4 nucleotides Dshi_2774 and Dshi_2775 are separated by 58 nucleotides
Dshi_2771: Dshi_2771 - Guanine deaminase (RefSeq), at 2,933,279 to 2,934,565
_2771
Dshi_2772: Dshi_2772 - SCP-like extracellular (RefSeq), at 2,934,712 to 2,935,170
_2772
Dshi_2773: Dshi_2773 - amidohydrolase (RefSeq), at 2,935,167 to 2,936,507
_2773
Dshi_2774: Dshi_2774 - histidinol-phosphate phosphatase, putative (RefSeq), at 2,936,504 to 2,937,325
_2774
Dshi_2775: Dshi_2775 - transcriptional regulator, XRE family (RefSeq), at 2,937,384 to 2,937,755
_2775
Position (kb)
2935
2936
2937 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2934.182 kb on - strand, within Dshi_2771 at 2934.182 kb on - strand, within Dshi_2771 at 2934.216 kb on + strand, within Dshi_2771 at 2934.265 kb on + strand, within Dshi_2771 at 2934.278 kb on - strand, within Dshi_2771 at 2934.311 kb on + strand, within Dshi_2771 at 2934.313 kb on + strand, within Dshi_2771 at 2934.433 kb on + strand, within Dshi_2771 at 2934.556 kb on + strand at 2934.609 kb on - strand at 2934.688 kb on + strand at 2934.727 kb on - strand at 2934.780 kb on + strand, within Dshi_2772 at 2934.921 kb on + strand, within Dshi_2772 at 2934.990 kb on - strand, within Dshi_2772 at 2934.990 kb on - strand, within Dshi_2772 at 2935.338 kb on + strand, within Dshi_2773 at 2935.368 kb on - strand, within Dshi_2773 at 2935.648 kb on - strand, within Dshi_2773 at 2935.737 kb on + strand, within Dshi_2773 at 2935.740 kb on - strand, within Dshi_2773 at 2935.740 kb on - strand, within Dshi_2773 at 2935.745 kb on - strand, within Dshi_2773 at 2935.856 kb on - strand, within Dshi_2773 at 2935.882 kb on - strand, within Dshi_2773 at 2935.889 kb on + strand, within Dshi_2773 at 2935.910 kb on + strand, within Dshi_2773 at 2935.917 kb on - strand, within Dshi_2773 at 2935.917 kb on - strand, within Dshi_2773 at 2936.123 kb on + strand, within Dshi_2773 at 2936.220 kb on - strand, within Dshi_2773 at 2936.238 kb on - strand, within Dshi_2773 at 2936.251 kb on - strand, within Dshi_2773 at 2936.295 kb on - strand, within Dshi_2773 at 2936.320 kb on + strand, within Dshi_2773 at 2936.328 kb on - strand, within Dshi_2773 at 2936.387 kb on + strand at 2936.390 kb on - strand at 2936.477 kb on - strand at 2937.328 kb on + strand at 2937.381 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,934,182 - Dshi_2771 0.70 +2.5 2,934,182 - Dshi_2771 0.70 -1.4 2,934,216 + Dshi_2771 0.73 -1.5 2,934,265 + Dshi_2771 0.77 -2.0 2,934,278 - Dshi_2771 0.78 +2.5 2,934,311 + Dshi_2771 0.80 -1.9 2,934,313 + Dshi_2771 0.80 +0.7 2,934,433 + Dshi_2771 0.90 +2.5 2,934,556 + -0.9 2,934,609 - -2.4 2,934,688 + +1.9 2,934,727 - +0.9 2,934,780 + Dshi_2772 0.15 -0.2 2,934,921 + Dshi_2772 0.46 +0.9 2,934,990 - Dshi_2772 0.61 +0.5 2,934,990 - Dshi_2772 0.61 -2.9 2,935,338 + Dshi_2773 0.13 -2.7 2,935,368 - Dshi_2773 0.15 +2.5 2,935,648 - Dshi_2773 0.36 +0.9 2,935,737 + Dshi_2773 0.43 +1.4 2,935,740 - Dshi_2773 0.43 -0.8 2,935,740 - Dshi_2773 0.43 +0.9 2,935,745 - Dshi_2773 0.43 +1.2 2,935,856 - Dshi_2773 0.51 -2.4 2,935,882 - Dshi_2773 0.53 +0.9 2,935,889 + Dshi_2773 0.54 +0.9 2,935,910 + Dshi_2773 0.55 -0.9 2,935,917 - Dshi_2773 0.56 -2.4 2,935,917 - Dshi_2773 0.56 +0.9 2,936,123 + Dshi_2773 0.71 -1.4 2,936,220 - Dshi_2773 0.79 +0.4 2,936,238 - Dshi_2773 0.80 +0.5 2,936,251 - Dshi_2773 0.81 -0.3 2,936,295 - Dshi_2773 0.84 -0.6 2,936,320 + Dshi_2773 0.86 +0.9 2,936,328 - Dshi_2773 0.87 -0.6 2,936,387 + +0.9 2,936,390 - +1.0 2,936,477 - +0.2 2,937,328 + +0.9 2,937,381 + -0.1
Or see this region's nucleotide sequence