Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2699
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,858,925 | - | Dshi_2697 | 0.86 | -1.9 | |
2,858,925 | - | Dshi_2697 | 0.86 | +1.8 | |
2,858,943 | - | Dshi_2697 | 0.87 | -0.8 | |
2,859,056 | + | -1.9 | |||
2,859,096 | + | -1.3 | |||
2,859,204 | + | Dshi_2698 | 0.17 | -1.2 | |
2,859,277 | + | Dshi_2698 | 0.27 | -3.0 | |
2,859,418 | - | Dshi_2698 | 0.46 | -1.2 | |
2,859,470 | + | Dshi_2698 | 0.53 | +0.1 | |
2,859,684 | + | Dshi_2698 | 0.82 | -2.6 | |
2,859,786 | - | +2.4 | |||
2,859,854 | - | -4.5 | |||
2,859,867 | - | -0.2 | |||
2,859,903 | + | Dshi_2699 | 0.12 | +0.8 | |
2,859,911 | - | Dshi_2699 | 0.13 | -2.0 | |
2,860,162 | + | Dshi_2699 | 0.49 | -1.0 | |
2,860,311 | - | Dshi_2699 | 0.71 | -3.0 | |
2,860,406 | + | Dshi_2699 | 0.84 | -0.1 | |
2,860,489 | - | +0.8 | |||
2,860,570 | + | +0.0 | |||
2,860,678 | + | +0.2 | |||
2,860,835 | + | -1.2 | |||
2,860,901 | - | +2.4 | |||
2,860,934 | + | +1.8 | |||
2,860,990 | - | +1.8 | |||
2,861,275 | + | Dshi_2700 | 0.41 | -0.7 | |
2,861,290 | - | Dshi_2700 | 0.43 | -1.7 | |
2,861,293 | + | Dshi_2700 | 0.44 | +0.8 | |
2,861,362 | - | Dshi_2700 | 0.54 | -3.2 | |
2,861,422 | - | Dshi_2700 | 0.62 | +0.4 | |
2,861,469 | + | Dshi_2700 | 0.69 | -1.1 |
Or see this region's nucleotide sequence