Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2573 and Dshi_2574 are separated by 270 nucleotides Dshi_2574 and Dshi_2575 are separated by 88 nucleotides Dshi_2575 and Dshi_2576 overlap by 4 nucleotides Dshi_2576 and Dshi_2577 are separated by 100 nucleotides
Dshi_2573: Dshi_2573 - hypothetical protein (RefSeq), at 2,740,015 to 2,740,470
_2573
Dshi_2574: Dshi_2574 - CoA-binding domain protein (RefSeq), at 2,740,741 to 2,741,226
_2574
Dshi_2575: Dshi_2575 - phosphoribosyl-ATP pyrophosphohydrolase (RefSeq), at 2,741,315 to 2,741,623
_2575
Dshi_2576: Dshi_2576 - imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq), at 2,741,620 to 2,742,381
_2576
Dshi_2577: Dshi_2577 - putative RNA methylase (RefSeq), at 2,742,482 to 2,743,606
_2577
Position (kb)
2741
2742 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2740.325 kb on - strand, within Dshi_2573 at 2740.425 kb on - strand at 2740.459 kb on + strand at 2740.459 kb on + strand at 2740.467 kb on - strand at 2740.478 kb on + strand at 2740.478 kb on + strand at 2740.486 kb on - strand at 2740.502 kb on + strand at 2740.554 kb on - strand at 2740.607 kb on + strand at 2740.683 kb on - strand at 2740.815 kb on - strand, within Dshi_2574 at 2741.201 kb on - strand at 2741.213 kb on + strand at 2742.564 kb on + strand at 2742.619 kb on - strand, within Dshi_2577
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,740,325 - Dshi_2573 0.68 +0.7 2,740,425 - +0.1 2,740,459 + -1.5 2,740,459 + +1.7 2,740,467 - +0.9 2,740,478 + +0.7 2,740,478 + +0.7 2,740,486 - -1.3 2,740,502 + -0.2 2,740,554 - -1.1 2,740,607 + +1.3 2,740,683 - -1.1 2,740,815 - Dshi_2574 0.15 -1.2 2,741,201 - -0.4 2,741,213 + -1.6 2,742,564 + +2.6 2,742,619 - Dshi_2577 0.12 -2.4
Or see this region's nucleotide sequence