Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2529 and Dshi_2530 are separated by 195 nucleotides Dshi_2530 and Dshi_2531 are separated by 96 nucleotides Dshi_2531 and Dshi_2532 are separated by 269 nucleotides
Dshi_2529: Dshi_2529 - hypothetical protein (RefSeq), at 2,689,949 to 2,691,163
_2529
Dshi_2530: Dshi_2530 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding (RefSeq), at 2,691,359 to 2,691,556
_2530
Dshi_2531: Dshi_2531 - hypothetical protein (RefSeq), at 2,691,653 to 2,691,925
_2531
Dshi_2532: Dshi_2532 - twin-arginine translocation pathway signal (RefSeq), at 2,692,195 to 2,692,497
_2532
Position (kb)
2691
2692 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2690.363 kb on + strand, within Dshi_2529 at 2690.363 kb on - strand, within Dshi_2529 at 2690.421 kb on + strand, within Dshi_2529 at 2690.477 kb on - strand, within Dshi_2529 at 2690.526 kb on + strand, within Dshi_2529 at 2690.534 kb on - strand, within Dshi_2529 at 2690.546 kb on - strand, within Dshi_2529 at 2690.595 kb on + strand, within Dshi_2529 at 2690.629 kb on + strand, within Dshi_2529 at 2690.648 kb on + strand, within Dshi_2529 at 2690.648 kb on + strand, within Dshi_2529 at 2690.661 kb on - strand, within Dshi_2529 at 2690.704 kb on + strand, within Dshi_2529 at 2690.713 kb on - strand, within Dshi_2529 at 2690.715 kb on + strand, within Dshi_2529 at 2690.740 kb on + strand, within Dshi_2529 at 2690.740 kb on - strand, within Dshi_2529 at 2690.758 kb on - strand, within Dshi_2529 at 2690.803 kb on - strand, within Dshi_2529 at 2690.869 kb on + strand, within Dshi_2529 at 2690.902 kb on + strand, within Dshi_2529 at 2690.933 kb on + strand, within Dshi_2529 at 2691.032 kb on + strand, within Dshi_2529 at 2691.033 kb on + strand, within Dshi_2529 at 2691.040 kb on - strand, within Dshi_2529 at 2691.041 kb on - strand, within Dshi_2529 at 2691.050 kb on - strand at 2691.052 kb on + strand at 2691.100 kb on + strand at 2691.158 kb on + strand at 2691.164 kb on - strand at 2691.193 kb on + strand at 2691.202 kb on - strand at 2691.227 kb on + strand at 2691.343 kb on + strand at 2691.355 kb on + strand at 2691.363 kb on - strand at 2691.429 kb on + strand, within Dshi_2530 at 2691.429 kb on + strand, within Dshi_2530 at 2691.476 kb on + strand, within Dshi_2530 at 2691.476 kb on + strand, within Dshi_2530 at 2691.484 kb on - strand, within Dshi_2530 at 2691.484 kb on - strand, within Dshi_2530 at 2691.544 kb on + strand at 2691.583 kb on + strand at 2691.637 kb on - strand at 2691.658 kb on - strand at 2691.658 kb on - strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.680 kb on + strand at 2691.688 kb on - strand, within Dshi_2531 at 2691.688 kb on - strand, within Dshi_2531 at 2691.688 kb on - strand, within Dshi_2531 at 2691.688 kb on - strand, within Dshi_2531 at 2691.688 kb on - strand, within Dshi_2531 at 2691.709 kb on + strand, within Dshi_2531 at 2691.709 kb on + strand, within Dshi_2531 at 2691.712 kb on + strand, within Dshi_2531 at 2691.754 kb on + strand, within Dshi_2531 at 2691.799 kb on - strand, within Dshi_2531 at 2691.815 kb on + strand, within Dshi_2531 at 2691.841 kb on + strand, within Dshi_2531 at 2691.841 kb on + strand, within Dshi_2531 at 2691.841 kb on + strand, within Dshi_2531 at 2691.849 kb on - strand, within Dshi_2531 at 2691.849 kb on - strand, within Dshi_2531 at 2691.849 kb on - strand, within Dshi_2531 at 2691.861 kb on - strand, within Dshi_2531 at 2691.928 kb on - strand at 2691.928 kb on - strand at 2691.930 kb on + strand at 2691.935 kb on + strand at 2691.953 kb on - strand at 2691.983 kb on + strand at 2691.989 kb on + strand at 2691.992 kb on - strand at 2692.007 kb on + strand at 2692.022 kb on + strand at 2692.071 kb on + strand at 2692.071 kb on + strand at 2692.102 kb on + strand at 2692.121 kb on + strand at 2692.127 kb on + strand at 2692.156 kb on + strand at 2692.188 kb on + strand at 2692.219 kb on - strand at 2692.249 kb on + strand, within Dshi_2532 at 2692.305 kb on - strand, within Dshi_2532 at 2692.325 kb on + strand, within Dshi_2532 at 2692.328 kb on - strand, within Dshi_2532 at 2692.366 kb on - strand, within Dshi_2532 at 2692.385 kb on - strand, within Dshi_2532 at 2692.408 kb on + strand, within Dshi_2532 at 2692.413 kb on + strand, within Dshi_2532 at 2692.441 kb on + strand, within Dshi_2532 at 2692.451 kb on + strand, within Dshi_2532 at 2692.453 kb on - strand, within Dshi_2532 at 2692.499 kb on + strand at 2692.507 kb on - strand at 2692.507 kb on - strand at 2692.519 kb on + strand at 2692.519 kb on + strand at 2692.529 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,690,363 + Dshi_2529 0.34 -3.8 2,690,363 - Dshi_2529 0.34 -2.2 2,690,421 + Dshi_2529 0.39 +0.8 2,690,477 - Dshi_2529 0.43 +1.1 2,690,526 + Dshi_2529 0.47 -2.5 2,690,534 - Dshi_2529 0.48 +3.0 2,690,546 - Dshi_2529 0.49 -1.0 2,690,595 + Dshi_2529 0.53 -1.2 2,690,629 + Dshi_2529 0.56 +3.9 2,690,648 + Dshi_2529 0.58 +1.1 2,690,648 + Dshi_2529 0.58 +2.9 2,690,661 - Dshi_2529 0.59 -0.5 2,690,704 + Dshi_2529 0.62 +0.1 2,690,713 - Dshi_2529 0.63 -0.3 2,690,715 + Dshi_2529 0.63 +3.7 2,690,740 + Dshi_2529 0.65 +0.4 2,690,740 - Dshi_2529 0.65 -3.0 2,690,758 - Dshi_2529 0.67 +1.7 2,690,803 - Dshi_2529 0.70 +0.4 2,690,869 + Dshi_2529 0.76 +0.5 2,690,902 + Dshi_2529 0.78 -3.0 2,690,933 + Dshi_2529 0.81 +1.2 2,691,032 + Dshi_2529 0.89 +0.2 2,691,033 + Dshi_2529 0.89 +3.3 2,691,040 - Dshi_2529 0.90 +0.6 2,691,041 - Dshi_2529 0.90 -0.6 2,691,050 - +0.7 2,691,052 + +0.7 2,691,100 + +3.2 2,691,158 + +0.3 2,691,164 - -2.7 2,691,193 + +3.5 2,691,202 - +1.2 2,691,227 + +0.8 2,691,343 + +2.0 2,691,355 + +0.2 2,691,363 - -2.3 2,691,429 + Dshi_2530 0.35 +0.0 2,691,429 + Dshi_2530 0.35 +1.4 2,691,476 + Dshi_2530 0.59 +0.3 2,691,476 + Dshi_2530 0.59 +0.8 2,691,484 - Dshi_2530 0.63 +0.1 2,691,484 - Dshi_2530 0.63 +0.9 2,691,544 + -1.2 2,691,583 + -0.5 2,691,637 - +0.9 2,691,658 - -0.3 2,691,658 - +2.0 2,691,680 + -2.5 2,691,680 + +0.0 2,691,680 + -3.0 2,691,680 + +2.5 2,691,680 + +0.3 2,691,680 + -4.0 2,691,680 + -2.5 2,691,688 - Dshi_2531 0.13 +0.2 2,691,688 - Dshi_2531 0.13 -1.2 2,691,688 - Dshi_2531 0.13 +3.7 2,691,688 - Dshi_2531 0.13 +1.5 2,691,688 - Dshi_2531 0.13 +1.1 2,691,709 + Dshi_2531 0.21 +0.2 2,691,709 + Dshi_2531 0.21 -0.5 2,691,712 + Dshi_2531 0.22 +1.5 2,691,754 + Dshi_2531 0.37 +0.2 2,691,799 - Dshi_2531 0.53 +0.2 2,691,815 + Dshi_2531 0.59 -1.0 2,691,841 + Dshi_2531 0.69 +2.5 2,691,841 + Dshi_2531 0.69 +2.4 2,691,841 + Dshi_2531 0.69 -2.5 2,691,849 - Dshi_2531 0.72 -1.3 2,691,849 - Dshi_2531 0.72 -1.2 2,691,849 - Dshi_2531 0.72 +0.7 2,691,861 - Dshi_2531 0.76 -0.0 2,691,928 - -1.1 2,691,928 - +2.7 2,691,930 + -2.3 2,691,935 + +2.1 2,691,953 - +0.7 2,691,983 + +0.7 2,691,989 + +0.9 2,691,992 - -3.7 2,692,007 + -0.6 2,692,022 + -3.0 2,692,071 + -3.3 2,692,071 + +0.4 2,692,102 + +1.1 2,692,121 + +1.2 2,692,127 + -1.6 2,692,156 + -1.3 2,692,188 + -1.9 2,692,219 - +0.4 2,692,249 + Dshi_2532 0.18 +3.7 2,692,305 - Dshi_2532 0.36 -2.9 2,692,325 + Dshi_2532 0.43 +1.1 2,692,328 - Dshi_2532 0.44 -0.3 2,692,366 - Dshi_2532 0.56 -0.2 2,692,385 - Dshi_2532 0.63 -0.1 2,692,408 + Dshi_2532 0.70 -1.1 2,692,413 + Dshi_2532 0.72 +0.3 2,692,441 + Dshi_2532 0.81 +0.3 2,692,451 + Dshi_2532 0.84 -1.4 2,692,453 - Dshi_2532 0.85 -4.2 2,692,499 + -3.9 2,692,507 - +0.5 2,692,507 - -2.9 2,692,519 + -3.7 2,692,519 + -0.3 2,692,529 + +0.3
Or see this region's nucleotide sequence