Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2494 and Dshi_2495 are separated by 131 nucleotides Dshi_2495 and Dshi_2496 are separated by 104 nucleotides Dshi_2496 and Dshi_2497 are separated by 241 nucleotides Dshi_2497 and Dshi_2498 overlap by 4 nucleotides
Dshi_2494: Dshi_2494 - acyl-CoA transferase/carnitine dehydratase-like protein (RefSeq), at 2,650,338 to 2,651,579
_2494
Dshi_2495: Dshi_2495 - cytochrome B561 (RefSeq), at 2,651,711 to 2,652,277
_2495
Dshi_2496: Dshi_2496 - putative signal transduction protein with EFhand domain (RefSeq), at 2,652,382 to 2,652,942
_2496
Dshi_2497: Dshi_2497 - two component transcriptional regulator, winged helix family (RefSeq), at 2,653,184 to 2,653,903
_2497
Dshi_2498: Dshi_2498 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,653,900 to 2,655,261
_2498
Position (kb)
2652
2653 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2651.464 kb on + strand at 2651.619 kb on + strand at 2651.625 kb on + strand at 2651.707 kb on + strand at 2651.749 kb on - strand at 2651.825 kb on + strand, within Dshi_2495 at 2651.862 kb on + strand, within Dshi_2495 at 2651.875 kb on - strand, within Dshi_2495 at 2651.886 kb on + strand, within Dshi_2495 at 2651.887 kb on + strand, within Dshi_2495 at 2651.978 kb on - strand, within Dshi_2495 at 2652.119 kb on + strand, within Dshi_2495 at 2652.142 kb on + strand, within Dshi_2495 at 2652.150 kb on + strand, within Dshi_2495 at 2652.150 kb on - strand, within Dshi_2495 at 2652.158 kb on - strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.168 kb on - strand, within Dshi_2495 at 2652.240 kb on - strand at 2652.250 kb on - strand at 2652.338 kb on + strand at 2652.346 kb on - strand at 2652.725 kb on - strand, within Dshi_2496 at 2652.739 kb on + strand, within Dshi_2496 at 2652.876 kb on + strand, within Dshi_2496 at 2652.878 kb on - strand, within Dshi_2496 at 2652.895 kb on - strand at 2652.912 kb on + strand at 2652.980 kb on - strand at 2653.067 kb on - strand at 2653.138 kb on + strand at 2653.146 kb on - strand at 2653.184 kb on + strand at 2653.192 kb on - strand at 2653.210 kb on - strand at 2653.266 kb on + strand, within Dshi_2497 at 2653.377 kb on + strand, within Dshi_2497 at 2653.390 kb on - strand, within Dshi_2497 at 2653.475 kb on - strand, within Dshi_2497 at 2653.539 kb on - strand, within Dshi_2497 at 2653.614 kb on + strand, within Dshi_2497 at 2653.715 kb on + strand, within Dshi_2497 at 2653.715 kb on + strand, within Dshi_2497 at 2653.715 kb on + strand, within Dshi_2497 at 2653.715 kb on + strand, within Dshi_2497 at 2653.723 kb on - strand, within Dshi_2497 at 2653.723 kb on - strand, within Dshi_2497 at 2653.723 kb on - strand, within Dshi_2497 at 2653.723 kb on - strand, within Dshi_2497 at 2653.749 kb on - strand, within Dshi_2497 at 2653.766 kb on + strand, within Dshi_2497 at 2653.774 kb on - strand, within Dshi_2497 at 2653.813 kb on + strand, within Dshi_2497 at 2653.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,651,464 + +0.7 2,651,619 + +0.6 2,651,625 + +0.7 2,651,707 + -2.9 2,651,749 - +1.8 2,651,825 + Dshi_2495 0.20 +0.7 2,651,862 + Dshi_2495 0.27 +2.3 2,651,875 - Dshi_2495 0.29 -0.8 2,651,886 + Dshi_2495 0.31 +0.7 2,651,887 + Dshi_2495 0.31 +0.7 2,651,978 - Dshi_2495 0.47 -1.0 2,652,119 + Dshi_2495 0.72 -3.4 2,652,142 + Dshi_2495 0.76 -0.9 2,652,150 + Dshi_2495 0.77 +0.5 2,652,150 - Dshi_2495 0.77 -0.4 2,652,158 - Dshi_2495 0.79 -0.9 2,652,160 + Dshi_2495 0.79 -1.6 2,652,160 + Dshi_2495 0.79 -1.6 2,652,160 + Dshi_2495 0.79 +0.7 2,652,160 + Dshi_2495 0.79 +0.7 2,652,168 - Dshi_2495 0.81 -1.5 2,652,240 - -0.9 2,652,250 - +0.7 2,652,338 + +0.7 2,652,346 - -2.9 2,652,725 - Dshi_2496 0.61 -0.0 2,652,739 + Dshi_2496 0.64 +0.1 2,652,876 + Dshi_2496 0.88 +0.7 2,652,878 - Dshi_2496 0.88 -1.7 2,652,895 - -0.2 2,652,912 + +1.7 2,652,980 - +0.7 2,653,067 - -1.0 2,653,138 + +2.7 2,653,146 - -1.3 2,653,184 + +1.0 2,653,192 - +1.1 2,653,210 - -1.9 2,653,266 + Dshi_2497 0.11 -1.7 2,653,377 + Dshi_2497 0.27 -0.3 2,653,390 - Dshi_2497 0.29 -1.5 2,653,475 - Dshi_2497 0.40 -0.5 2,653,539 - Dshi_2497 0.49 +1.5 2,653,614 + Dshi_2497 0.60 -2.3 2,653,715 + Dshi_2497 0.74 -3.0 2,653,715 + Dshi_2497 0.74 -1.6 2,653,715 + Dshi_2497 0.74 -0.3 2,653,715 + Dshi_2497 0.74 +1.7 2,653,723 - Dshi_2497 0.75 +0.7 2,653,723 - Dshi_2497 0.75 -2.1 2,653,723 - Dshi_2497 0.75 +0.7 2,653,723 - Dshi_2497 0.75 -0.0 2,653,749 - Dshi_2497 0.78 -2.1 2,653,766 + Dshi_2497 0.81 +0.7 2,653,774 - Dshi_2497 0.82 +0.7 2,653,813 + Dshi_2497 0.87 -1.3 2,653,928 - +2.7
Or see this region's nucleotide sequence