Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2492 and Dshi_2493 overlap by 11 nucleotides Dshi_2493 and Dshi_2494 are separated by 1 nucleotides Dshi_2494 and Dshi_2495 are separated by 131 nucleotides Dshi_2495 and Dshi_2496 are separated by 104 nucleotides
Dshi_2492: Dshi_2492 - succinyl-CoA synthetase, alpha subunit (RefSeq), at 2,648,581 to 2,649,480
_2492
Dshi_2493: Dshi_2493 - hypothetical protein (RefSeq), at 2,649,470 to 2,650,336
_2493
Dshi_2494: Dshi_2494 - acyl-CoA transferase/carnitine dehydratase-like protein (RefSeq), at 2,650,338 to 2,651,579
_2494
Dshi_2495: Dshi_2495 - cytochrome B561 (RefSeq), at 2,651,711 to 2,652,277
_2495
Dshi_2496: Dshi_2496 - putative signal transduction protein with EFhand domain (RefSeq), at 2,652,382 to 2,652,942
_2496
Position (kb)
2650
2651
2652 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2649.346 kb on + strand, within Dshi_2492 at 2649.395 kb on - strand at 2649.427 kb on + strand at 2649.440 kb on - strand at 2649.523 kb on + strand at 2649.531 kb on - strand at 2649.603 kb on + strand, within Dshi_2493 at 2649.722 kb on + strand, within Dshi_2493 at 2649.729 kb on + strand, within Dshi_2493 at 2649.734 kb on - strand, within Dshi_2493 at 2649.739 kb on + strand, within Dshi_2493 at 2649.750 kb on + strand, within Dshi_2493 at 2649.781 kb on - strand, within Dshi_2493 at 2649.842 kb on + strand, within Dshi_2493 at 2649.850 kb on - strand, within Dshi_2493 at 2649.896 kb on - strand, within Dshi_2493 at 2649.941 kb on + strand, within Dshi_2493 at 2649.967 kb on + strand, within Dshi_2493 at 2649.974 kb on + strand, within Dshi_2493 at 2649.975 kb on - strand, within Dshi_2493 at 2650.017 kb on - strand, within Dshi_2493 at 2650.068 kb on + strand, within Dshi_2493 at 2650.149 kb on + strand, within Dshi_2493 at 2650.157 kb on - strand, within Dshi_2493 at 2650.179 kb on + strand, within Dshi_2493 at 2650.224 kb on + strand at 2650.307 kb on - strand at 2650.375 kb on + strand at 2650.392 kb on + strand at 2650.421 kb on + strand at 2650.431 kb on + strand at 2650.451 kb on + strand at 2650.497 kb on + strand, within Dshi_2494 at 2650.526 kb on - strand, within Dshi_2494 at 2650.839 kb on + strand, within Dshi_2494 at 2650.847 kb on - strand, within Dshi_2494 at 2650.925 kb on - strand, within Dshi_2494 at 2650.956 kb on + strand, within Dshi_2494 at 2650.992 kb on - strand, within Dshi_2494 at 2650.994 kb on + strand, within Dshi_2494 at 2651.092 kb on + strand, within Dshi_2494 at 2651.100 kb on - strand, within Dshi_2494 at 2651.102 kb on + strand, within Dshi_2494 at 2651.102 kb on + strand, within Dshi_2494 at 2651.103 kb on + strand, within Dshi_2494 at 2651.110 kb on - strand, within Dshi_2494 at 2651.110 kb on - strand, within Dshi_2494 at 2651.110 kb on - strand, within Dshi_2494 at 2651.110 kb on - strand, within Dshi_2494 at 2651.218 kb on - strand, within Dshi_2494 at 2651.287 kb on - strand, within Dshi_2494 at 2651.292 kb on - strand, within Dshi_2494 at 2651.464 kb on + strand at 2651.619 kb on + strand at 2651.625 kb on + strand at 2651.707 kb on + strand at 2651.749 kb on - strand at 2651.825 kb on + strand, within Dshi_2495 at 2651.862 kb on + strand, within Dshi_2495 at 2651.875 kb on - strand, within Dshi_2495 at 2651.886 kb on + strand, within Dshi_2495 at 2651.887 kb on + strand, within Dshi_2495 at 2651.978 kb on - strand, within Dshi_2495 at 2652.119 kb on + strand, within Dshi_2495 at 2652.142 kb on + strand, within Dshi_2495 at 2652.150 kb on + strand, within Dshi_2495 at 2652.150 kb on - strand, within Dshi_2495 at 2652.158 kb on - strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.160 kb on + strand, within Dshi_2495 at 2652.168 kb on - strand, within Dshi_2495 at 2652.240 kb on - strand at 2652.250 kb on - strand at 2652.338 kb on + strand at 2652.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,649,346 + Dshi_2492 0.85 -1.3 2,649,395 - +1.3 2,649,427 + +0.7 2,649,440 - -2.3 2,649,523 + -0.5 2,649,531 - -2.6 2,649,603 + Dshi_2493 0.15 -1.9 2,649,722 + Dshi_2493 0.29 -0.5 2,649,729 + Dshi_2493 0.30 -1.7 2,649,734 - Dshi_2493 0.30 +2.1 2,649,739 + Dshi_2493 0.31 +1.5 2,649,750 + Dshi_2493 0.32 -1.3 2,649,781 - Dshi_2493 0.36 -0.8 2,649,842 + Dshi_2493 0.43 -1.6 2,649,850 - Dshi_2493 0.44 -0.5 2,649,896 - Dshi_2493 0.49 -2.1 2,649,941 + Dshi_2493 0.54 +2.7 2,649,967 + Dshi_2493 0.57 -2.1 2,649,974 + Dshi_2493 0.58 -3.1 2,649,975 - Dshi_2493 0.58 -3.0 2,650,017 - Dshi_2493 0.63 +1.7 2,650,068 + Dshi_2493 0.69 -0.9 2,650,149 + Dshi_2493 0.78 -1.9 2,650,157 - Dshi_2493 0.79 +0.3 2,650,179 + Dshi_2493 0.82 +0.2 2,650,224 + +2.3 2,650,307 - +3.7 2,650,375 + -2.6 2,650,392 + +1.7 2,650,421 + -1.3 2,650,431 + -1.3 2,650,451 + +1.4 2,650,497 + Dshi_2494 0.13 +1.5 2,650,526 - Dshi_2494 0.15 -0.7 2,650,839 + Dshi_2494 0.40 +2.7 2,650,847 - Dshi_2494 0.41 +0.7 2,650,925 - Dshi_2494 0.47 +1.4 2,650,956 + Dshi_2494 0.50 -0.9 2,650,992 - Dshi_2494 0.53 +0.9 2,650,994 + Dshi_2494 0.53 +2.3 2,651,092 + Dshi_2494 0.61 +1.1 2,651,100 - Dshi_2494 0.61 +0.7 2,651,102 + Dshi_2494 0.62 +1.7 2,651,102 + Dshi_2494 0.62 +1.2 2,651,103 + Dshi_2494 0.62 -1.4 2,651,110 - Dshi_2494 0.62 +0.7 2,651,110 - Dshi_2494 0.62 -0.1 2,651,110 - Dshi_2494 0.62 -0.3 2,651,110 - Dshi_2494 0.62 -1.2 2,651,218 - Dshi_2494 0.71 -0.6 2,651,287 - Dshi_2494 0.76 -1.1 2,651,292 - Dshi_2494 0.77 -0.9 2,651,464 + +0.7 2,651,619 + +0.6 2,651,625 + +0.7 2,651,707 + -2.9 2,651,749 - +1.8 2,651,825 + Dshi_2495 0.20 +0.7 2,651,862 + Dshi_2495 0.27 +2.3 2,651,875 - Dshi_2495 0.29 -0.8 2,651,886 + Dshi_2495 0.31 +0.7 2,651,887 + Dshi_2495 0.31 +0.7 2,651,978 - Dshi_2495 0.47 -1.0 2,652,119 + Dshi_2495 0.72 -3.4 2,652,142 + Dshi_2495 0.76 -0.9 2,652,150 + Dshi_2495 0.77 +0.5 2,652,150 - Dshi_2495 0.77 -0.4 2,652,158 - Dshi_2495 0.79 -0.9 2,652,160 + Dshi_2495 0.79 -1.6 2,652,160 + Dshi_2495 0.79 -1.6 2,652,160 + Dshi_2495 0.79 +0.7 2,652,160 + Dshi_2495 0.79 +0.7 2,652,168 - Dshi_2495 0.81 -1.5 2,652,240 - -0.9 2,652,250 - +0.7 2,652,338 + +0.7 2,652,346 - -2.9
Or see this region's nucleotide sequence