Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2453 and Dshi_2454 are separated by 43 nucleotides Dshi_2454 and Dshi_2455 overlap by 4 nucleotides Dshi_2455 and Dshi_2456 overlap by 4 nucleotides
Dshi_2453: Dshi_2453 - hypothetical protein (RefSeq), at 2,597,049 to 2,598,080
_2453
Dshi_2454: Dshi_2454 - hypothetical protein (RefSeq), at 2,598,124 to 2,598,690
_2454
Dshi_2455: Dshi_2455 - AAA ATPase central domain protein (RefSeq), at 2,598,687 to 2,600,012
_2455
Dshi_2456: Dshi_2456 - hypothetical protein (RefSeq), at 2,600,009 to 2,604,343
_2456
Position (kb)
2598
2599
2600
2601 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2597.835 kb on + strand, within Dshi_2453 at 2597.835 kb on + strand, within Dshi_2453 at 2597.846 kb on + strand, within Dshi_2453 at 2597.854 kb on - strand, within Dshi_2453 at 2597.856 kb on + strand, within Dshi_2453 at 2597.927 kb on + strand, within Dshi_2453 at 2597.990 kb on + strand at 2598.017 kb on + strand at 2598.070 kb on - strand at 2598.193 kb on + strand, within Dshi_2454 at 2598.242 kb on + strand, within Dshi_2454 at 2598.250 kb on - strand, within Dshi_2454 at 2598.316 kb on + strand, within Dshi_2454 at 2598.324 kb on - strand, within Dshi_2454 at 2598.335 kb on + strand, within Dshi_2454 at 2598.357 kb on - strand, within Dshi_2454 at 2598.367 kb on - strand, within Dshi_2454 at 2598.389 kb on - strand, within Dshi_2454 at 2598.480 kb on + strand, within Dshi_2454 at 2598.524 kb on - strand, within Dshi_2454 at 2598.650 kb on - strand at 2598.654 kb on + strand at 2598.795 kb on - strand at 2598.869 kb on + strand, within Dshi_2455 at 2599.001 kb on + strand, within Dshi_2455 at 2599.059 kb on - strand, within Dshi_2455 at 2599.061 kb on + strand, within Dshi_2455 at 2599.145 kb on - strand, within Dshi_2455 at 2599.164 kb on - strand, within Dshi_2455 at 2599.227 kb on - strand, within Dshi_2455 at 2599.242 kb on - strand, within Dshi_2455 at 2599.295 kb on + strand, within Dshi_2455 at 2599.375 kb on - strand, within Dshi_2455 at 2599.375 kb on - strand, within Dshi_2455 at 2599.384 kb on + strand, within Dshi_2455 at 2599.384 kb on + strand, within Dshi_2455 at 2599.400 kb on + strand, within Dshi_2455 at 2599.456 kb on + strand, within Dshi_2455 at 2599.507 kb on - strand, within Dshi_2455 at 2599.545 kb on + strand, within Dshi_2455 at 2599.552 kb on - strand, within Dshi_2455 at 2599.553 kb on - strand, within Dshi_2455 at 2599.562 kb on + strand, within Dshi_2455 at 2599.572 kb on - strand, within Dshi_2455 at 2599.596 kb on - strand, within Dshi_2455 at 2599.723 kb on + strand, within Dshi_2455 at 2599.743 kb on + strand, within Dshi_2455 at 2599.765 kb on + strand, within Dshi_2455 at 2600.101 kb on + strand at 2600.111 kb on + strand at 2600.127 kb on - strand at 2600.182 kb on - strand at 2600.218 kb on - strand at 2600.330 kb on - strand at 2600.362 kb on - strand at 2600.394 kb on + strand at 2600.394 kb on + strand at 2600.402 kb on - strand at 2600.427 kb on - strand at 2600.477 kb on + strand, within Dshi_2456 at 2600.482 kb on + strand, within Dshi_2456 at 2600.576 kb on + strand, within Dshi_2456 at 2600.584 kb on - strand, within Dshi_2456 at 2600.596 kb on - strand, within Dshi_2456 at 2600.688 kb on - strand, within Dshi_2456 at 2600.762 kb on + strand, within Dshi_2456 at 2600.777 kb on - strand, within Dshi_2456 at 2600.778 kb on + strand, within Dshi_2456 at 2600.804 kb on + strand, within Dshi_2456 at 2600.836 kb on + strand, within Dshi_2456 at 2600.836 kb on + strand, within Dshi_2456 at 2600.836 kb on + strand, within Dshi_2456 at 2600.879 kb on - strand, within Dshi_2456 at 2600.935 kb on + strand, within Dshi_2456 at 2600.935 kb on + strand, within Dshi_2456
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,597,835 + Dshi_2453 0.76 +0.8 2,597,835 + Dshi_2453 0.76 +0.6 2,597,846 + Dshi_2453 0.77 -2.6 2,597,854 - Dshi_2453 0.78 +1.6 2,597,856 + Dshi_2453 0.78 +0.6 2,597,927 + Dshi_2453 0.85 -2.0 2,597,990 + +0.6 2,598,017 + -3.7 2,598,070 - +1.3 2,598,193 + Dshi_2454 0.12 -0.2 2,598,242 + Dshi_2454 0.21 -4.2 2,598,250 - Dshi_2454 0.22 -2.0 2,598,316 + Dshi_2454 0.34 -1.2 2,598,324 - Dshi_2454 0.35 -2.4 2,598,335 + Dshi_2454 0.37 +1.6 2,598,357 - Dshi_2454 0.41 -0.0 2,598,367 - Dshi_2454 0.43 +0.1 2,598,389 - Dshi_2454 0.47 -2.4 2,598,480 + Dshi_2454 0.63 -2.5 2,598,524 - Dshi_2454 0.71 +1.6 2,598,650 - +0.6 2,598,654 + +0.6 2,598,795 - +0.6 2,598,869 + Dshi_2455 0.14 +0.1 2,599,001 + Dshi_2455 0.24 -1.4 2,599,059 - Dshi_2455 0.28 -1.0 2,599,061 + Dshi_2455 0.28 +1.1 2,599,145 - Dshi_2455 0.35 -0.0 2,599,164 - Dshi_2455 0.36 -2.0 2,599,227 - Dshi_2455 0.41 -1.2 2,599,242 - Dshi_2455 0.42 +1.6 2,599,295 + Dshi_2455 0.46 -2.6 2,599,375 - Dshi_2455 0.52 -2.9 2,599,375 - Dshi_2455 0.52 +0.6 2,599,384 + Dshi_2455 0.53 +0.6 2,599,384 + Dshi_2455 0.53 +0.6 2,599,400 + Dshi_2455 0.54 +0.6 2,599,456 + Dshi_2455 0.58 +1.0 2,599,507 - Dshi_2455 0.62 +0.6 2,599,545 + Dshi_2455 0.65 -0.4 2,599,552 - Dshi_2455 0.65 +0.6 2,599,553 - Dshi_2455 0.65 -1.9 2,599,562 + Dshi_2455 0.66 +0.6 2,599,572 - Dshi_2455 0.67 +2.6 2,599,596 - Dshi_2455 0.69 -0.2 2,599,723 + Dshi_2455 0.78 -0.4 2,599,743 + Dshi_2455 0.80 +0.6 2,599,765 + Dshi_2455 0.81 -0.4 2,600,101 + +2.1 2,600,111 + -1.4 2,600,127 - +0.6 2,600,182 - -1.4 2,600,218 - -1.3 2,600,330 - -1.4 2,600,362 - -1.3 2,600,394 + +0.6 2,600,394 + -0.6 2,600,402 - +2.1 2,600,427 - -2.3 2,600,477 + Dshi_2456 0.11 -2.6 2,600,482 + Dshi_2456 0.11 +2.6 2,600,576 + Dshi_2456 0.13 -0.4 2,600,584 - Dshi_2456 0.13 +0.3 2,600,596 - Dshi_2456 0.14 +1.7 2,600,688 - Dshi_2456 0.16 +1.6 2,600,762 + Dshi_2456 0.17 -1.3 2,600,777 - Dshi_2456 0.18 -1.4 2,600,778 + Dshi_2456 0.18 +0.6 2,600,804 + Dshi_2456 0.18 -0.6 2,600,836 + Dshi_2456 0.19 -0.0 2,600,836 + Dshi_2456 0.19 -1.7 2,600,836 + Dshi_2456 0.19 -3.1 2,600,879 - Dshi_2456 0.20 +0.6 2,600,935 + Dshi_2456 0.21 -0.4 2,600,935 + Dshi_2456 0.21 +0.6
Or see this region's nucleotide sequence