Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2365 and Dshi_2366 are separated by 135 nucleotides Dshi_2366 and Dshi_2367 are separated by 112 nucleotides Dshi_2367 and Dshi_2368 overlap by 1 nucleotides
Dshi_2365: Dshi_2365 - urease, alpha subunit (RefSeq), at 2,498,640 to 2,500,349
_2365
Dshi_2366: Dshi_2366 - hypothetical protein (RefSeq), at 2,500,485 to 2,500,814
_2366
Dshi_2367: Dshi_2367 - alginate regulatory protein AlgP (RefSeq), at 2,500,927 to 2,501,649
_2367
Dshi_2368: Dshi_2368 - urease, beta subunit (RefSeq), at 2,501,649 to 2,501,954
_2368
Position (kb)
2500
2501 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2499.520 kb on + strand, within Dshi_2365 at 2499.552 kb on - strand, within Dshi_2365 at 2499.557 kb on - strand, within Dshi_2365 at 2499.598 kb on - strand, within Dshi_2365 at 2499.607 kb on - strand, within Dshi_2365 at 2499.676 kb on + strand, within Dshi_2365 at 2499.920 kb on + strand, within Dshi_2365 at 2500.082 kb on + strand, within Dshi_2365 at 2500.082 kb on + strand, within Dshi_2365 at 2500.096 kb on - strand, within Dshi_2365 at 2500.168 kb on + strand, within Dshi_2365 at 2500.176 kb on - strand, within Dshi_2365 at 2500.178 kb on + strand, within Dshi_2365 at 2500.306 kb on + strand at 2500.345 kb on + strand at 2500.439 kb on + strand at 2500.491 kb on - strand at 2500.540 kb on - strand, within Dshi_2366 at 2500.636 kb on + strand, within Dshi_2366 at 2500.636 kb on + strand, within Dshi_2366 at 2500.644 kb on - strand, within Dshi_2366 at 2500.644 kb on - strand, within Dshi_2366 at 2500.644 kb on - strand, within Dshi_2366 at 2500.679 kb on - strand, within Dshi_2366 at 2500.747 kb on + strand, within Dshi_2366 at 2500.750 kb on - strand, within Dshi_2366 at 2500.789 kb on + strand at 2500.791 kb on - strand at 2500.791 kb on - strand at 2500.797 kb on - strand at 2500.802 kb on - strand at 2500.802 kb on - strand at 2500.817 kb on - strand at 2500.843 kb on + strand at 2500.908 kb on + strand at 2500.913 kb on + strand at 2500.970 kb on - strand at 2500.979 kb on + strand at 2500.979 kb on + strand at 2500.987 kb on - strand at 2501.033 kb on - strand, within Dshi_2367 at 2501.145 kb on - strand, within Dshi_2367 at 2501.296 kb on - strand, within Dshi_2367 at 2501.306 kb on + strand, within Dshi_2367 at 2501.307 kb on - strand, within Dshi_2367 at 2501.357 kb on + strand, within Dshi_2367 at 2501.363 kb on + strand, within Dshi_2367 at 2501.421 kb on - strand, within Dshi_2367 at 2501.446 kb on + strand, within Dshi_2367 at 2501.471 kb on + strand, within Dshi_2367 at 2501.479 kb on - strand, within Dshi_2367 at 2501.479 kb on - strand, within Dshi_2367 at 2501.545 kb on - strand, within Dshi_2367 at 2501.614 kb on + strand at 2501.623 kb on + strand at 2501.623 kb on - strand at 2501.631 kb on - strand at 2501.698 kb on + strand, within Dshi_2368 at 2501.713 kb on + strand, within Dshi_2368 at 2501.789 kb on - strand, within Dshi_2368 at 2501.803 kb on + strand, within Dshi_2368
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,499,520 + Dshi_2365 0.51 +1.5 2,499,552 - Dshi_2365 0.53 -0.5 2,499,557 - Dshi_2365 0.54 +3.7 2,499,598 - Dshi_2365 0.56 -0.1 2,499,607 - Dshi_2365 0.57 +0.5 2,499,676 + Dshi_2365 0.61 -2.1 2,499,920 + Dshi_2365 0.75 -1.1 2,500,082 + Dshi_2365 0.84 +0.1 2,500,082 + Dshi_2365 0.84 -0.1 2,500,096 - Dshi_2365 0.85 +1.8 2,500,168 + Dshi_2365 0.89 -0.1 2,500,176 - Dshi_2365 0.90 -3.8 2,500,178 + Dshi_2365 0.90 +0.2 2,500,306 + -1.4 2,500,345 + -0.5 2,500,439 + +0.5 2,500,491 - +4.8 2,500,540 - Dshi_2366 0.17 -2.9 2,500,636 + Dshi_2366 0.46 +3.7 2,500,636 + Dshi_2366 0.46 -0.9 2,500,644 - Dshi_2366 0.48 -2.1 2,500,644 - Dshi_2366 0.48 -2.6 2,500,644 - Dshi_2366 0.48 -2.1 2,500,679 - Dshi_2366 0.59 -1.5 2,500,747 + Dshi_2366 0.79 +1.5 2,500,750 - Dshi_2366 0.80 -2.6 2,500,789 + -0.1 2,500,791 - -1.0 2,500,791 - -3.8 2,500,797 - -2.3 2,500,802 - -3.7 2,500,802 - +2.5 2,500,817 - -2.2 2,500,843 + +2.5 2,500,908 + -2.3 2,500,913 + -2.3 2,500,970 - -2.5 2,500,979 + -0.5 2,500,979 + +0.6 2,500,987 - -0.2 2,501,033 - Dshi_2367 0.15 +0.8 2,501,145 - Dshi_2367 0.30 -0.5 2,501,296 - Dshi_2367 0.51 +0.1 2,501,306 + Dshi_2367 0.52 -0.8 2,501,307 - Dshi_2367 0.53 +0.4 2,501,357 + Dshi_2367 0.59 +2.8 2,501,363 + Dshi_2367 0.60 +2.1 2,501,421 - Dshi_2367 0.68 -2.8 2,501,446 + Dshi_2367 0.72 +1.0 2,501,471 + Dshi_2367 0.75 -0.8 2,501,479 - Dshi_2367 0.76 +0.5 2,501,479 - Dshi_2367 0.76 -1.1 2,501,545 - Dshi_2367 0.85 -2.1 2,501,614 + -1.5 2,501,623 + +0.5 2,501,623 - +1.7 2,501,631 - +0.2 2,501,698 + Dshi_2368 0.16 -1.5 2,501,713 + Dshi_2368 0.21 -0.5 2,501,789 - Dshi_2368 0.46 -2.9 2,501,803 + Dshi_2368 0.50 +1.4
Or see this region's nucleotide sequence