Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2358 and Dshi_2359 are separated by 515 nucleotides Dshi_2359 and Dshi_2360 are separated by 125 nucleotides Dshi_2360 and Dshi_2361 overlap by 8 nucleotides
Dshi_2358: Dshi_2358 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 2,492,678 to 2,493,325
_2358
Dshi_2359: Dshi_2359 - hypothetical protein (RefSeq), at 2,493,841 to 2,495,091
_2359
Dshi_2360: Dshi_2360 - urease accessory protein UreG (RefSeq), at 2,495,217 to 2,495,825
_2360
Dshi_2361: Dshi_2361 - Carboxymuconolactone decarboxylase (RefSeq), at 2,495,818 to 2,496,201
_2361
Position (kb)
2493
2494
2495
2496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2492.908 kb on - strand, within Dshi_2358 at 2492.920 kb on - strand, within Dshi_2358 at 2492.970 kb on + strand, within Dshi_2358 at 2492.970 kb on + strand, within Dshi_2358 at 2492.997 kb on + strand, within Dshi_2358 at 2493.070 kb on + strand, within Dshi_2358 at 2493.155 kb on + strand, within Dshi_2358 at 2493.163 kb on - strand, within Dshi_2358 at 2493.188 kb on + strand, within Dshi_2358 at 2493.201 kb on - strand, within Dshi_2358 at 2493.201 kb on - strand, within Dshi_2358 at 2493.235 kb on - strand, within Dshi_2358 at 2493.240 kb on + strand, within Dshi_2358 at 2493.250 kb on + strand, within Dshi_2358 at 2493.288 kb on + strand at 2493.358 kb on + strand at 2493.390 kb on - strand at 2493.455 kb on + strand at 2493.463 kb on - strand at 2493.524 kb on + strand at 2493.570 kb on - strand at 2493.763 kb on + strand at 2493.778 kb on + strand at 2493.831 kb on + strand at 2493.919 kb on + strand at 2494.006 kb on + strand, within Dshi_2359 at 2494.043 kb on + strand, within Dshi_2359 at 2494.049 kb on - strand, within Dshi_2359 at 2494.455 kb on - strand, within Dshi_2359 at 2494.491 kb on - strand, within Dshi_2359 at 2494.565 kb on + strand, within Dshi_2359 at 2494.570 kb on + strand, within Dshi_2359 at 2494.577 kb on - strand, within Dshi_2359 at 2494.677 kb on - strand, within Dshi_2359 at 2494.900 kb on - strand, within Dshi_2359 at 2495.212 kb on + strand at 2495.334 kb on - strand, within Dshi_2360 at 2495.388 kb on - strand, within Dshi_2360 at 2495.405 kb on + strand, within Dshi_2360 at 2495.438 kb on - strand, within Dshi_2360 at 2495.438 kb on - strand, within Dshi_2360 at 2495.502 kb on + strand, within Dshi_2360 at 2495.616 kb on + strand, within Dshi_2360 at 2495.632 kb on + strand, within Dshi_2360 at 2495.700 kb on - strand, within Dshi_2360 at 2495.725 kb on - strand, within Dshi_2360 at 2495.738 kb on + strand, within Dshi_2360 at 2495.746 kb on - strand, within Dshi_2360 at 2495.751 kb on - strand, within Dshi_2360 at 2495.946 kb on - strand, within Dshi_2361 at 2495.997 kb on - strand, within Dshi_2361 at 2496.069 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,492,908 - Dshi_2358 0.35 -1.5 2,492,920 - Dshi_2358 0.37 -2.1 2,492,970 + Dshi_2358 0.45 +0.2 2,492,970 + Dshi_2358 0.45 +0.3 2,492,997 + Dshi_2358 0.49 -0.7 2,493,070 + Dshi_2358 0.60 +0.5 2,493,155 + Dshi_2358 0.74 -0.7 2,493,163 - Dshi_2358 0.75 -0.1 2,493,188 + Dshi_2358 0.79 -1.5 2,493,201 - Dshi_2358 0.81 +1.1 2,493,201 - Dshi_2358 0.81 +0.0 2,493,235 - Dshi_2358 0.86 -0.5 2,493,240 + Dshi_2358 0.87 -1.1 2,493,250 + Dshi_2358 0.88 -0.7 2,493,288 + -0.5 2,493,358 + +3.2 2,493,390 - -3.7 2,493,455 + -0.5 2,493,463 - -0.5 2,493,524 + +0.9 2,493,570 - +1.5 2,493,763 + -1.0 2,493,778 + -1.8 2,493,831 + +0.4 2,493,919 + -0.5 2,494,006 + Dshi_2359 0.13 +1.5 2,494,043 + Dshi_2359 0.16 +0.3 2,494,049 - Dshi_2359 0.17 -0.3 2,494,455 - Dshi_2359 0.49 -1.3 2,494,491 - Dshi_2359 0.52 -1.9 2,494,565 + Dshi_2359 0.58 -1.6 2,494,570 + Dshi_2359 0.58 -3.1 2,494,577 - Dshi_2359 0.59 -0.2 2,494,677 - Dshi_2359 0.67 -1.6 2,494,900 - Dshi_2359 0.85 +0.9 2,495,212 + +0.6 2,495,334 - Dshi_2360 0.19 -1.4 2,495,388 - Dshi_2360 0.28 -3.7 2,495,405 + Dshi_2360 0.31 -2.9 2,495,438 - Dshi_2360 0.36 +0.5 2,495,438 - Dshi_2360 0.36 -2.0 2,495,502 + Dshi_2360 0.47 -1.8 2,495,616 + Dshi_2360 0.66 +0.2 2,495,632 + Dshi_2360 0.68 +0.3 2,495,700 - Dshi_2360 0.79 +4.3 2,495,725 - Dshi_2360 0.83 +0.0 2,495,738 + Dshi_2360 0.86 +0.5 2,495,746 - Dshi_2360 0.87 -1.0 2,495,751 - Dshi_2360 0.88 -0.8 2,495,946 - Dshi_2361 0.33 -0.6 2,495,997 - Dshi_2361 0.47 +2.3 2,496,069 - +3.1
Or see this region's nucleotide sequence