Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2354 and Dshi_2355 are separated by 10 nucleotides Dshi_2355 and Dshi_2356 are separated by 100 nucleotides
Dshi_2354: Dshi_2354 - major facilitator superfamily MFS_1 (RefSeq), at 2,487,671 to 2,488,822
_2354
Dshi_2355: Dshi_2355 - VWA containing CoxE family protein (RefSeq), at 2,488,833 to 2,490,095
_2355
Dshi_2356: Dshi_2356 - ATPase associated with various cellular activities AAA_5 (RefSeq), at 2,490,196 to 2,491,107
_2356
Position (kb)
2488
2489
2490
2491 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2487.881 kb on - strand, within Dshi_2354 at 2487.922 kb on - strand, within Dshi_2354 at 2488.040 kb on + strand, within Dshi_2354 at 2488.189 kb on - strand, within Dshi_2354 at 2488.496 kb on + strand, within Dshi_2354 at 2488.562 kb on + strand, within Dshi_2354 at 2488.631 kb on - strand, within Dshi_2354 at 2488.638 kb on + strand, within Dshi_2354 at 2488.638 kb on + strand, within Dshi_2354 at 2488.684 kb on - strand, within Dshi_2354 at 2488.709 kb on + strand at 2488.756 kb on + strand at 2488.801 kb on + strand at 2488.824 kb on - strand at 2489.210 kb on - strand, within Dshi_2355 at 2489.269 kb on + strand, within Dshi_2355 at 2489.287 kb on + strand, within Dshi_2355 at 2489.314 kb on - strand, within Dshi_2355 at 2489.318 kb on - strand, within Dshi_2355 at 2489.323 kb on + strand, within Dshi_2355 at 2489.532 kb on - strand, within Dshi_2355 at 2489.602 kb on + strand, within Dshi_2355 at 2489.767 kb on + strand, within Dshi_2355 at 2489.856 kb on - strand, within Dshi_2355 at 2490.003 kb on - strand at 2490.139 kb on + strand at 2490.525 kb on - strand, within Dshi_2356 at 2490.810 kb on - strand, within Dshi_2356 at 2490.859 kb on - strand, within Dshi_2356 at 2490.910 kb on + strand, within Dshi_2356
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,487,881 - Dshi_2354 0.18 -0.7 2,487,922 - Dshi_2354 0.22 -1.8 2,488,040 + Dshi_2354 0.32 -0.8 2,488,189 - Dshi_2354 0.45 -1.0 2,488,496 + Dshi_2354 0.72 +2.1 2,488,562 + Dshi_2354 0.77 +0.8 2,488,631 - Dshi_2354 0.83 -1.5 2,488,638 + Dshi_2354 0.84 +0.2 2,488,638 + Dshi_2354 0.84 -2.8 2,488,684 - Dshi_2354 0.88 -0.5 2,488,709 + +3.7 2,488,756 + -1.2 2,488,801 + -0.6 2,488,824 - +2.5 2,489,210 - Dshi_2355 0.30 +0.5 2,489,269 + Dshi_2355 0.35 -1.8 2,489,287 + Dshi_2355 0.36 +0.5 2,489,314 - Dshi_2355 0.38 -1.2 2,489,318 - Dshi_2355 0.38 +1.5 2,489,323 + Dshi_2355 0.39 -0.0 2,489,532 - Dshi_2355 0.55 -2.0 2,489,602 + Dshi_2355 0.61 -0.0 2,489,767 + Dshi_2355 0.74 -1.0 2,489,856 - Dshi_2355 0.81 +1.3 2,490,003 - -0.9 2,490,139 + -0.7 2,490,525 - Dshi_2356 0.36 +1.4 2,490,810 - Dshi_2356 0.67 +1.0 2,490,859 - Dshi_2356 0.73 -1.9 2,490,910 + Dshi_2356 0.78 -1.3
Or see this region's nucleotide sequence