Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2281 and Dshi_2282 are separated by 293 nucleotides Dshi_2282 and Dshi_2283 are separated by 211 nucleotides
Dshi_2281: Dshi_2281 - periplasmic binding protein/LacI transcriptional regulator (RefSeq), at 2,408,517 to 2,409,482
_2281
Dshi_2282: Dshi_2282 - transcriptional regulator, AraC family (RefSeq), at 2,409,776 to 2,410,660
_2282
Dshi_2283: Dshi_2283 - monooxygenase (RefSeq), at 2,410,872 to 2,412,536
_2283
Position (kb)
2409
2410
2411 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2408.779 kb on + strand, within Dshi_2281 at 2408.789 kb on + strand, within Dshi_2281 at 2408.806 kb on - strand, within Dshi_2281 at 2408.812 kb on + strand, within Dshi_2281 at 2408.812 kb on + strand, within Dshi_2281 at 2408.812 kb on + strand, within Dshi_2281 at 2408.812 kb on + strand, within Dshi_2281 at 2408.812 kb on + strand, within Dshi_2281 at 2408.820 kb on - strand, within Dshi_2281 at 2408.835 kb on + strand, within Dshi_2281 at 2408.841 kb on + strand, within Dshi_2281 at 2408.860 kb on + strand, within Dshi_2281 at 2408.892 kb on + strand, within Dshi_2281 at 2408.900 kb on - strand, within Dshi_2281 at 2408.971 kb on - strand, within Dshi_2281 at 2408.996 kb on + strand, within Dshi_2281 at 2409.033 kb on - strand, within Dshi_2281 at 2409.035 kb on + strand, within Dshi_2281 at 2409.043 kb on - strand, within Dshi_2281 at 2409.045 kb on + strand, within Dshi_2281 at 2409.053 kb on - strand, within Dshi_2281 at 2409.163 kb on - strand, within Dshi_2281 at 2409.228 kb on - strand, within Dshi_2281 at 2409.238 kb on - strand, within Dshi_2281 at 2409.283 kb on + strand, within Dshi_2281 at 2409.283 kb on + strand, within Dshi_2281 at 2409.360 kb on + strand, within Dshi_2281 at 2409.394 kb on + strand at 2409.430 kb on + strand at 2409.438 kb on - strand at 2409.474 kb on + strand at 2409.476 kb on + strand at 2409.482 kb on - strand at 2409.490 kb on - strand at 2409.491 kb on + strand at 2409.491 kb on + strand at 2409.522 kb on + strand at 2409.530 kb on - strand at 2409.566 kb on + strand at 2409.581 kb on + strand at 2409.612 kb on - strand at 2409.617 kb on + strand at 2409.639 kb on + strand at 2409.661 kb on + strand at 2409.679 kb on - strand at 2409.685 kb on + strand at 2409.753 kb on + strand at 2409.753 kb on + strand at 2409.761 kb on - strand at 2409.761 kb on - strand at 2409.761 kb on - strand at 2409.761 kb on - strand at 2409.761 kb on - strand at 2409.763 kb on - strand at 2409.791 kb on - strand at 2409.810 kb on + strand at 2409.810 kb on + strand at 2409.821 kb on + strand at 2409.822 kb on + strand at 2409.825 kb on + strand at 2409.825 kb on + strand at 2409.828 kb on - strand at 2409.829 kb on - strand at 2409.853 kb on - strand at 2409.863 kb on - strand at 2409.866 kb on + strand, within Dshi_2282 at 2409.908 kb on + strand, within Dshi_2282 at 2409.929 kb on - strand, within Dshi_2282 at 2409.929 kb on - strand, within Dshi_2282 at 2409.943 kb on + strand, within Dshi_2282 at 2409.951 kb on - strand, within Dshi_2282 at 2409.956 kb on + strand, within Dshi_2282 at 2410.019 kb on + strand, within Dshi_2282 at 2410.032 kb on - strand, within Dshi_2282 at 2410.127 kb on - strand, within Dshi_2282 at 2410.129 kb on - strand, within Dshi_2282 at 2410.129 kb on - strand, within Dshi_2282 at 2410.178 kb on - strand, within Dshi_2282 at 2410.224 kb on - strand, within Dshi_2282 at 2410.232 kb on - strand, within Dshi_2282 at 2410.239 kb on + strand, within Dshi_2282 at 2410.243 kb on + strand, within Dshi_2282 at 2410.339 kb on + strand, within Dshi_2282 at 2410.402 kb on + strand, within Dshi_2282 at 2410.409 kb on + strand, within Dshi_2282 at 2410.416 kb on - strand, within Dshi_2282 at 2410.475 kb on - strand, within Dshi_2282 at 2410.489 kb on - strand, within Dshi_2282 at 2410.489 kb on - strand, within Dshi_2282 at 2410.489 kb on - strand, within Dshi_2282 at 2410.505 kb on + strand, within Dshi_2282 at 2410.507 kb on + strand, within Dshi_2282 at 2410.588 kb on + strand at 2410.716 kb on - strand at 2410.724 kb on - strand at 2410.769 kb on + strand at 2410.786 kb on + strand at 2410.861 kb on + strand at 2410.882 kb on + strand at 2410.935 kb on + strand at 2410.939 kb on - strand at 2410.989 kb on - strand at 2410.989 kb on - strand at 2410.995 kb on - strand at 2411.000 kb on + strand at 2411.024 kb on + strand at 2411.025 kb on + strand at 2411.075 kb on + strand, within Dshi_2283 at 2411.075 kb on + strand, within Dshi_2283 at 2411.086 kb on + strand, within Dshi_2283 at 2411.116 kb on - strand, within Dshi_2283 at 2411.126 kb on - strand, within Dshi_2283 at 2411.126 kb on - strand, within Dshi_2283 at 2411.157 kb on + strand, within Dshi_2283 at 2411.165 kb on - strand, within Dshi_2283 at 2411.165 kb on - strand, within Dshi_2283 at 2411.225 kb on + strand, within Dshi_2283 at 2411.275 kb on - strand, within Dshi_2283 at 2411.282 kb on + strand, within Dshi_2283 at 2411.317 kb on - strand, within Dshi_2283 at 2411.353 kb on + strand, within Dshi_2283 at 2411.401 kb on + strand, within Dshi_2283 at 2411.401 kb on + strand, within Dshi_2283 at 2411.409 kb on - strand, within Dshi_2283 at 2411.452 kb on - strand, within Dshi_2283 at 2411.473 kb on - strand, within Dshi_2283 at 2411.475 kb on + strand, within Dshi_2283 at 2411.475 kb on + strand, within Dshi_2283 at 2411.475 kb on + strand, within Dshi_2283 at 2411.483 kb on - strand, within Dshi_2283 at 2411.510 kb on - strand, within Dshi_2283 at 2411.541 kb on - strand, within Dshi_2283 at 2411.593 kb on + strand, within Dshi_2283 at 2411.611 kb on - strand, within Dshi_2283 at 2411.611 kb on - strand, within Dshi_2283 at 2411.634 kb on + strand, within Dshi_2283 at 2411.657 kb on + strand, within Dshi_2283 at 2411.657 kb on + strand, within Dshi_2283
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,408,779 + Dshi_2281 0.27 -1.5 2,408,789 + Dshi_2281 0.28 -0.6 2,408,806 - Dshi_2281 0.30 -0.7 2,408,812 + Dshi_2281 0.31 +2.3 2,408,812 + Dshi_2281 0.31 -1.2 2,408,812 + Dshi_2281 0.31 -1.5 2,408,812 + Dshi_2281 0.31 -0.3 2,408,812 + Dshi_2281 0.31 +0.4 2,408,820 - Dshi_2281 0.31 -2.4 2,408,835 + Dshi_2281 0.33 +1.1 2,408,841 + Dshi_2281 0.34 -1.2 2,408,860 + Dshi_2281 0.36 -1.8 2,408,892 + Dshi_2281 0.39 +0.2 2,408,900 - Dshi_2281 0.40 +1.2 2,408,971 - Dshi_2281 0.47 +1.1 2,408,996 + Dshi_2281 0.50 +1.2 2,409,033 - Dshi_2281 0.53 +2.1 2,409,035 + Dshi_2281 0.54 -0.2 2,409,043 - Dshi_2281 0.54 -0.2 2,409,045 + Dshi_2281 0.55 -1.5 2,409,053 - Dshi_2281 0.55 +0.9 2,409,163 - Dshi_2281 0.67 -1.1 2,409,228 - Dshi_2281 0.74 -1.1 2,409,238 - Dshi_2281 0.75 +0.3 2,409,283 + Dshi_2281 0.79 +0.3 2,409,283 + Dshi_2281 0.79 -1.0 2,409,360 + Dshi_2281 0.87 +0.5 2,409,394 + -0.2 2,409,430 + +1.1 2,409,438 - +1.0 2,409,474 + +0.2 2,409,476 + -0.1 2,409,482 - +2.7 2,409,490 - +1.7 2,409,491 + -1.4 2,409,491 + -0.1 2,409,522 + -3.4 2,409,530 - +3.2 2,409,566 + +0.5 2,409,581 + -0.1 2,409,612 - -0.7 2,409,617 + -0.4 2,409,639 + -0.8 2,409,661 + -0.9 2,409,679 - -0.3 2,409,685 + +1.5 2,409,753 + -0.1 2,409,753 + +1.3 2,409,761 - +0.1 2,409,761 - -1.1 2,409,761 - +0.5 2,409,761 - +0.3 2,409,761 - +0.6 2,409,763 - +0.3 2,409,791 - +1.3 2,409,810 + -0.9 2,409,810 + +4.3 2,409,821 + -0.9 2,409,822 + -0.2 2,409,825 + -2.2 2,409,825 + +0.1 2,409,828 - +1.7 2,409,829 - -2.8 2,409,853 - -0.3 2,409,863 - -3.7 2,409,866 + Dshi_2282 0.10 +1.4 2,409,908 + Dshi_2282 0.15 -0.8 2,409,929 - Dshi_2282 0.17 +0.6 2,409,929 - Dshi_2282 0.17 -0.1 2,409,943 + Dshi_2282 0.19 -0.3 2,409,951 - Dshi_2282 0.20 -4.4 2,409,956 + Dshi_2282 0.20 -0.6 2,410,019 + Dshi_2282 0.27 +0.8 2,410,032 - Dshi_2282 0.29 -0.9 2,410,127 - Dshi_2282 0.40 +0.5 2,410,129 - Dshi_2282 0.40 +0.3 2,410,129 - Dshi_2282 0.40 +0.3 2,410,178 - Dshi_2282 0.45 +0.4 2,410,224 - Dshi_2282 0.51 -0.7 2,410,232 - Dshi_2282 0.52 -1.5 2,410,239 + Dshi_2282 0.52 -0.5 2,410,243 + Dshi_2282 0.53 +0.4 2,410,339 + Dshi_2282 0.64 -2.1 2,410,402 + Dshi_2282 0.71 +1.0 2,410,409 + Dshi_2282 0.72 -1.2 2,410,416 - Dshi_2282 0.72 +0.9 2,410,475 - Dshi_2282 0.79 +0.5 2,410,489 - Dshi_2282 0.81 +0.5 2,410,489 - Dshi_2282 0.81 -2.9 2,410,489 - Dshi_2282 0.81 -0.2 2,410,505 + Dshi_2282 0.82 -0.2 2,410,507 + Dshi_2282 0.83 -0.3 2,410,588 + -0.1 2,410,716 - -1.0 2,410,724 - +3.6 2,410,769 + +0.6 2,410,786 + -0.4 2,410,861 + -2.9 2,410,882 + +1.5 2,410,935 + +1.3 2,410,939 - +0.8 2,410,989 - -1.9 2,410,989 - +1.1 2,410,995 - -1.2 2,411,000 + +1.2 2,411,024 + +0.3 2,411,025 + +1.5 2,411,075 + Dshi_2283 0.12 -2.1 2,411,075 + Dshi_2283 0.12 +1.7 2,411,086 + Dshi_2283 0.13 -0.8 2,411,116 - Dshi_2283 0.15 -0.9 2,411,126 - Dshi_2283 0.15 +1.5 2,411,126 - Dshi_2283 0.15 -0.2 2,411,157 + Dshi_2283 0.17 +0.5 2,411,165 - Dshi_2283 0.18 -0.5 2,411,165 - Dshi_2283 0.18 +0.5 2,411,225 + Dshi_2283 0.21 -0.1 2,411,275 - Dshi_2283 0.24 +2.3 2,411,282 + Dshi_2283 0.25 -0.7 2,411,317 - Dshi_2283 0.27 -0.2 2,411,353 + Dshi_2283 0.29 +0.2 2,411,401 + Dshi_2283 0.32 -1.3 2,411,401 + Dshi_2283 0.32 -2.1 2,411,409 - Dshi_2283 0.32 +1.8 2,411,452 - Dshi_2283 0.35 +0.4 2,411,473 - Dshi_2283 0.36 -0.2 2,411,475 + Dshi_2283 0.36 -0.1 2,411,475 + Dshi_2283 0.36 +0.9 2,411,475 + Dshi_2283 0.36 +0.5 2,411,483 - Dshi_2283 0.37 +0.5 2,411,510 - Dshi_2283 0.38 +0.9 2,411,541 - Dshi_2283 0.40 +2.1 2,411,593 + Dshi_2283 0.43 -3.6 2,411,611 - Dshi_2283 0.44 -0.2 2,411,611 - Dshi_2283 0.44 -1.5 2,411,634 + Dshi_2283 0.46 -0.7 2,411,657 + Dshi_2283 0.47 +0.1 2,411,657 + Dshi_2283 0.47 +0.1
Or see this region's nucleotide sequence