Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2262
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,383,689 | - | -0.2 | |||
2,383,724 | - | +3.1 | |||
2,385,779 | - | +0.3 | |||
2,385,836 | + | Dshi_2263 | 0.19 | -2.2 | |
2,385,847 | - | Dshi_2263 | 0.21 | +0.3 | |
2,385,886 | + | Dshi_2263 | 0.28 | +1.7 | |
2,385,900 | + | Dshi_2263 | 0.30 | +0.1 | |
2,385,900 | + | Dshi_2263 | 0.30 | -1.8 | |
2,385,908 | - | Dshi_2263 | 0.32 | +0.4 | |
2,385,926 | - | Dshi_2263 | 0.35 | -1.0 | |
2,385,931 | + | Dshi_2263 | 0.36 | +0.9 | |
2,385,939 | + | Dshi_2263 | 0.37 | +0.5 | |
2,386,037 | - | Dshi_2263 | 0.54 | -0.6 | |
2,386,084 | - | Dshi_2263 | 0.62 | -1.9 | |
2,386,086 | + | Dshi_2263 | 0.62 | -2.6 | |
2,386,094 | - | Dshi_2263 | 0.64 | -2.1 | |
2,386,094 | - | Dshi_2263 | 0.64 | +2.9 | |
2,386,170 | - | Dshi_2263 | 0.77 | +0.5 | |
2,386,191 | + | Dshi_2263 | 0.80 | -0.9 | |
2,386,199 | - | Dshi_2263 | 0.82 | -2.3 | |
2,386,199 | - | Dshi_2263 | 0.82 | +3.5 | |
2,386,399 | - | +0.8 | |||
2,386,407 | + | -0.8 | |||
2,386,485 | - | -4.1 | |||
2,386,490 | - | -1.5 | |||
2,386,513 | - | -0.3 | |||
2,386,526 | + | -2.1 | |||
2,386,597 | - | Dshi_2264 | 0.10 | -0.6 | |
2,386,599 | + | Dshi_2264 | 0.10 | -2.6 |
Or see this region's nucleotide sequence