Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2019 and Dshi_2020 are separated by 101 nucleotides Dshi_2020 and Dshi_2021 are separated by 228 nucleotides
Dshi_2019: Dshi_2019 - ferredoxin-dependent glutamate synthase (RefSeq), at 2,137,715 to 2,139,322
_2019
Dshi_2020: Dshi_2020 - phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (RefSeq), at 2,139,424 to 2,141,055
_2020
Dshi_2021: Dshi_2021 - extracellular solute-binding protein family 1 (RefSeq), at 2,141,284 to 2,142,312
_2021
Position (kb)
2139
2140
2141
2142 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2138.603 kb on - strand, within Dshi_2019 at 2138.702 kb on - strand, within Dshi_2019 at 2138.725 kb on - strand, within Dshi_2019 at 2138.764 kb on + strand, within Dshi_2019 at 2138.836 kb on + strand, within Dshi_2019 at 2139.120 kb on + strand, within Dshi_2019 at 2139.190 kb on + strand at 2139.214 kb on + strand at 2139.224 kb on - strand at 2139.370 kb on + strand at 2139.410 kb on + strand at 2139.653 kb on - strand, within Dshi_2020 at 2139.749 kb on - strand, within Dshi_2020 at 2139.788 kb on + strand, within Dshi_2020 at 2139.901 kb on - strand, within Dshi_2020 at 2139.904 kb on + strand, within Dshi_2020 at 2139.937 kb on + strand, within Dshi_2020 at 2140.096 kb on - strand, within Dshi_2020 at 2140.291 kb on + strand, within Dshi_2020 at 2140.309 kb on - strand, within Dshi_2020 at 2140.318 kb on + strand, within Dshi_2020 at 2140.331 kb on - strand, within Dshi_2020 at 2140.367 kb on - strand, within Dshi_2020 at 2140.393 kb on + strand, within Dshi_2020 at 2140.488 kb on - strand, within Dshi_2020 at 2140.497 kb on - strand, within Dshi_2020 at 2140.523 kb on + strand, within Dshi_2020 at 2140.568 kb on - strand, within Dshi_2020 at 2140.644 kb on + strand, within Dshi_2020 at 2140.670 kb on - strand, within Dshi_2020 at 2140.678 kb on - strand, within Dshi_2020 at 2140.712 kb on - strand, within Dshi_2020 at 2140.748 kb on - strand, within Dshi_2020 at 2140.835 kb on + strand, within Dshi_2020 at 2140.840 kb on + strand, within Dshi_2020 at 2140.985 kb on + strand at 2140.985 kb on + strand at 2140.993 kb on - strand at 2140.993 kb on - strand at 2140.995 kb on + strand at 2141.003 kb on - strand at 2141.032 kb on + strand at 2141.077 kb on - strand at 2141.140 kb on + strand at 2141.157 kb on + strand at 2141.167 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,138,603 - Dshi_2019 0.55 -3.4 2,138,702 - Dshi_2019 0.61 +1.8 2,138,725 - Dshi_2019 0.63 +2.6 2,138,764 + Dshi_2019 0.65 +1.0 2,138,836 + Dshi_2019 0.70 +0.0 2,139,120 + Dshi_2019 0.87 +3.3 2,139,190 + +0.4 2,139,214 + -2.2 2,139,224 - +0.4 2,139,370 + +0.2 2,139,410 + -1.9 2,139,653 - Dshi_2020 0.14 -0.3 2,139,749 - Dshi_2020 0.20 +0.7 2,139,788 + Dshi_2020 0.22 -0.0 2,139,901 - Dshi_2020 0.29 +0.2 2,139,904 + Dshi_2020 0.29 +0.2 2,139,937 + Dshi_2020 0.31 -1.0 2,140,096 - Dshi_2020 0.41 +1.1 2,140,291 + Dshi_2020 0.53 +2.1 2,140,309 - Dshi_2020 0.54 +0.2 2,140,318 + Dshi_2020 0.55 -1.5 2,140,331 - Dshi_2020 0.56 -2.8 2,140,367 - Dshi_2020 0.58 -0.3 2,140,393 + Dshi_2020 0.59 -1.6 2,140,488 - Dshi_2020 0.65 +1.2 2,140,497 - Dshi_2020 0.66 -1.6 2,140,523 + Dshi_2020 0.67 -0.9 2,140,568 - Dshi_2020 0.70 +0.4 2,140,644 + Dshi_2020 0.75 -0.6 2,140,670 - Dshi_2020 0.76 +1.5 2,140,678 - Dshi_2020 0.77 -1.6 2,140,712 - Dshi_2020 0.79 +0.4 2,140,748 - Dshi_2020 0.81 -0.3 2,140,835 + Dshi_2020 0.86 +1.9 2,140,840 + Dshi_2020 0.87 -0.9 2,140,985 + +0.2 2,140,985 + +1.0 2,140,993 - -0.6 2,140,993 - +1.7 2,140,995 + -1.2 2,141,003 - -0.3 2,141,032 + -0.5 2,141,077 - -3.3 2,141,140 + -0.7 2,141,157 + -0.1 2,141,167 - -0.1
Or see this region's nucleotide sequence