Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2015 and Dshi_2016 overlap by 1 nucleotides Dshi_2016 and Dshi_2017 are separated by 0 nucleotides Dshi_2017 and Dshi_2018 are separated by 151 nucleotides Dshi_2018 and Dshi_2019 are separated by 82 nucleotides
Dshi_2015: Dshi_2015 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,134,480 to 2,135,361
_2015
Dshi_2016: Dshi_2016 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,135,361 to 2,136,215
_2016
Dshi_2017: Dshi_2017 - ABC transporter related (RefSeq), at 2,136,216 to 2,137,217
_2017
Dshi_2018: Dshi_2018 - phage-related hypothetical protein (RefSeq), at 2,137,369 to 2,137,632
_2018
Dshi_2019: Dshi_2019 - ferredoxin-dependent glutamate synthase (RefSeq), at 2,137,715 to 2,139,322
_2019
Position (kb)
2136
2137
2138 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2135.232 kb on + strand, within Dshi_2015 at 2135.237 kb on + strand, within Dshi_2015 at 2135.304 kb on + strand at 2135.357 kb on + strand at 2135.376 kb on + strand at 2135.395 kb on + strand at 2135.401 kb on + strand at 2135.421 kb on + strand at 2135.590 kb on + strand, within Dshi_2016 at 2135.764 kb on + strand, within Dshi_2016 at 2135.808 kb on + strand, within Dshi_2016 at 2135.808 kb on + strand, within Dshi_2016 at 2135.927 kb on + strand, within Dshi_2016 at 2136.048 kb on - strand, within Dshi_2016 at 2136.080 kb on + strand, within Dshi_2016 at 2136.090 kb on + strand, within Dshi_2016 at 2136.108 kb on - strand, within Dshi_2016 at 2136.267 kb on - strand at 2136.277 kb on - strand at 2136.283 kb on + strand at 2136.606 kb on + strand, within Dshi_2017 at 2136.633 kb on - strand, within Dshi_2017 at 2136.650 kb on - strand, within Dshi_2017 at 2137.052 kb on + strand, within Dshi_2017 at 2137.354 kb on + strand at 2137.399 kb on + strand, within Dshi_2018 at 2137.407 kb on - strand, within Dshi_2018 at 2137.417 kb on - strand, within Dshi_2018 at 2137.461 kb on - strand, within Dshi_2018 at 2137.466 kb on - strand, within Dshi_2018 at 2137.741 kb on - strand at 2137.828 kb on + strand at 2137.842 kb on - strand at 2137.955 kb on - strand, within Dshi_2019 at 2138.077 kb on + strand, within Dshi_2019 at 2138.195 kb on - strand, within Dshi_2019
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 2,135,232 + Dshi_2015 0.85 -0.3 2,135,237 + Dshi_2015 0.86 -1.2 2,135,304 + +3.3 2,135,357 + +1.8 2,135,376 + -1.2 2,135,395 + -0.9 2,135,401 + -0.4 2,135,421 + -0.9 2,135,590 + Dshi_2016 0.27 -3.7 2,135,764 + Dshi_2016 0.47 -1.3 2,135,808 + Dshi_2016 0.52 +1.4 2,135,808 + Dshi_2016 0.52 -0.4 2,135,927 + Dshi_2016 0.66 -2.4 2,136,048 - Dshi_2016 0.80 -1.6 2,136,080 + Dshi_2016 0.84 -0.1 2,136,090 + Dshi_2016 0.85 -1.0 2,136,108 - Dshi_2016 0.87 +0.3 2,136,267 - -1.0 2,136,277 - -1.5 2,136,283 + -1.6 2,136,606 + Dshi_2017 0.39 -1.3 2,136,633 - Dshi_2017 0.42 -0.8 2,136,650 - Dshi_2017 0.43 +0.4 2,137,052 + Dshi_2017 0.83 +0.5 2,137,354 + +0.9 2,137,399 + Dshi_2018 0.11 +1.9 2,137,407 - Dshi_2018 0.14 -0.3 2,137,417 - Dshi_2018 0.18 -0.8 2,137,461 - Dshi_2018 0.35 +1.2 2,137,466 - Dshi_2018 0.37 -0.5 2,137,741 - -3.0 2,137,828 + -2.0 2,137,842 - -2.6 2,137,955 - Dshi_2019 0.15 -0.4 2,138,077 + Dshi_2019 0.23 +1.9 2,138,195 - Dshi_2019 0.30 +0.3
Or see this region's nucleotide sequence