Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1880
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,957,484 | - | Dshi_1879 | 0.21 | +0.8 | |
1,957,541 | - | Dshi_1879 | 0.26 | +0.4 | |
1,957,551 | + | Dshi_1879 | 0.27 | +3.4 | |
1,957,559 | - | Dshi_1879 | 0.27 | -1.0 | |
1,957,616 | + | Dshi_1879 | 0.32 | -1.5 | |
1,957,654 | - | Dshi_1879 | 0.35 | -1.7 | |
1,957,654 | - | Dshi_1879 | 0.35 | -1.5 | |
1,957,654 | - | Dshi_1879 | 0.35 | +0.8 | |
1,957,671 | + | Dshi_1879 | 0.37 | -1.0 | |
1,957,679 | + | Dshi_1879 | 0.37 | -1.2 | |
1,957,683 | + | Dshi_1879 | 0.38 | +3.8 | |
1,957,688 | - | Dshi_1879 | 0.38 | -0.2 | |
1,957,885 | + | Dshi_1879 | 0.55 | +0.8 | |
1,958,183 | - | Dshi_1879 | 0.80 | -1.4 | |
1,958,204 | - | Dshi_1879 | 0.82 | -1.6 | |
1,958,219 | - | Dshi_1879 | 0.83 | -0.8 | |
1,958,305 | - | -0.7 | |||
1,958,305 | - | -1.2 | |||
1,958,574 | - | Dshi_1880 | 0.89 | -0.4 | |
1,958,574 | - | Dshi_1880 | 0.89 | -0.4 | |
1,958,577 | - | -0.2 | |||
1,958,587 | - | -1.6 | |||
1,958,721 | + | +3.1 | |||
1,959,228 | - | Dshi_1881 | 0.46 | +0.2 | |
1,959,286 | - | Dshi_1881 | 0.50 | +3.4 | |
1,959,287 | + | Dshi_1881 | 0.50 | +0.8 |
Or see this region's nucleotide sequence