Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1674 and Dshi_1675 are separated by 26 nucleotides Dshi_1675 and Dshi_1676 are separated by 11 nucleotides Dshi_1676 and Dshi_1677 overlap by 4 nucleotides
Dshi_1674: Dshi_1674 - hypothetical protein (RefSeq), at 1,743,527 to 1,743,829
_1674
Dshi_1675: Dshi_1675 - MetF protein-like protein (RefSeq), at 1,743,856 to 1,744,782
_1675
Dshi_1676: Dshi_1676 - HAD-superfamily hydrolase, subfamily IA, variant 3 (RefSeq), at 1,744,794 to 1,745,453
_1676
Dshi_1677: Dshi_1677 - Methionine synthase (RefSeq), at 1,745,450 to 1,746,439
_1677
Position (kb)
1744
1745
1746 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1743.826 kb on - strand at 1743.857 kb on - strand at 1743.858 kb on - strand at 1743.889 kb on + strand at 1743.908 kb on + strand at 1743.985 kb on - strand, within Dshi_1675 at 1743.998 kb on - strand, within Dshi_1675 at 1744.087 kb on - strand, within Dshi_1675 at 1744.124 kb on + strand, within Dshi_1675 at 1744.217 kb on - strand, within Dshi_1675 at 1744.288 kb on - strand, within Dshi_1675 at 1744.299 kb on + strand, within Dshi_1675 at 1744.313 kb on - strand, within Dshi_1675 at 1744.596 kb on + strand, within Dshi_1675 at 1744.611 kb on + strand at 1744.686 kb on + strand, within Dshi_1675 at 1744.686 kb on + strand, within Dshi_1675 at 1744.694 kb on - strand at 1744.694 kb on - strand at 1744.694 kb on - strand at 1744.694 kb on - strand at 1744.743 kb on + strand at 1744.769 kb on - strand at 1744.861 kb on + strand, within Dshi_1676 at 1744.978 kb on + strand, within Dshi_1676 at 1745.001 kb on - strand, within Dshi_1676 at 1745.002 kb on - strand, within Dshi_1676 at 1745.100 kb on + strand, within Dshi_1676 at 1745.100 kb on + strand, within Dshi_1676 at 1745.123 kb on - strand, within Dshi_1676 at 1745.153 kb on - strand, within Dshi_1676 at 1745.183 kb on - strand, within Dshi_1676 at 1745.234 kb on + strand, within Dshi_1676 at 1745.344 kb on + strand, within Dshi_1676 at 1745.352 kb on - strand, within Dshi_1676 at 1745.405 kb on + strand at 1745.824 kb on + strand, within Dshi_1677 at 1745.866 kb on + strand, within Dshi_1677 at 1746.295 kb on + strand, within Dshi_1677 at 1746.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,743,826 - -2.5 1,743,857 - -1.3 1,743,858 - -2.0 1,743,889 + +1.4 1,743,908 + -2.0 1,743,985 - Dshi_1675 0.14 -1.1 1,743,998 - Dshi_1675 0.15 -3.3 1,744,087 - Dshi_1675 0.25 -0.8 1,744,124 + Dshi_1675 0.29 -1.7 1,744,217 - Dshi_1675 0.39 -1.7 1,744,288 - Dshi_1675 0.47 +0.8 1,744,299 + Dshi_1675 0.48 -3.3 1,744,313 - Dshi_1675 0.49 -2.0 1,744,596 + Dshi_1675 0.80 -3.5 1,744,611 + +0.6 1,744,686 + Dshi_1675 0.90 -0.7 1,744,686 + Dshi_1675 0.90 +0.2 1,744,694 - +0.3 1,744,694 - -0.4 1,744,694 - +0.3 1,744,694 - -1.0 1,744,743 + -1.8 1,744,769 - -0.8 1,744,861 + Dshi_1676 0.10 -0.9 1,744,978 + Dshi_1676 0.28 -3.2 1,745,001 - Dshi_1676 0.31 -2.7 1,745,002 - Dshi_1676 0.32 -3.0 1,745,100 + Dshi_1676 0.46 -2.6 1,745,100 + Dshi_1676 0.46 +0.6 1,745,123 - Dshi_1676 0.50 -0.4 1,745,153 - Dshi_1676 0.54 +0.9 1,745,183 - Dshi_1676 0.59 -1.0 1,745,234 + Dshi_1676 0.67 -0.8 1,745,344 + Dshi_1676 0.83 -1.5 1,745,352 - Dshi_1676 0.85 -0.7 1,745,405 + -2.3 1,745,824 + Dshi_1677 0.38 +0.6 1,745,866 + Dshi_1677 0.42 -2.4 1,746,295 + Dshi_1677 0.85 -1.2 1,746,449 + +0.2
Or see this region's nucleotide sequence