Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1662 and Dshi_1663 are separated by 263 nucleotides Dshi_1663 and Dshi_1664 are separated by 139 nucleotides
Dshi_1662: Dshi_1662 - putative nitrate transport protein (RefSeq), at 1,727,175 to 1,728,353
_1662
Dshi_1663: Dshi_1663 - nitrate transporter substrate-binding (RefSeq), at 1,728,617 to 1,729,984
_1663
Dshi_1664: Dshi_1664 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,730,124 to 1,731,206
_1664
Position (kb)
1728
1729
1730 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1727.662 kb on + strand, within Dshi_1662 at 1727.705 kb on + strand, within Dshi_1662 at 1727.730 kb on + strand, within Dshi_1662 at 1727.730 kb on + strand, within Dshi_1662 at 1727.738 kb on - strand, within Dshi_1662 at 1727.775 kb on - strand, within Dshi_1662 at 1727.805 kb on - strand, within Dshi_1662 at 1727.821 kb on - strand, within Dshi_1662 at 1727.873 kb on - strand, within Dshi_1662 at 1727.970 kb on + strand, within Dshi_1662 at 1727.984 kb on - strand, within Dshi_1662 at 1727.997 kb on + strand, within Dshi_1662 at 1728.125 kb on + strand, within Dshi_1662 at 1728.165 kb on + strand, within Dshi_1662 at 1728.165 kb on - strand, within Dshi_1662 at 1728.200 kb on + strand, within Dshi_1662 at 1728.221 kb on + strand, within Dshi_1662 at 1728.247 kb on - strand at 1728.247 kb on - strand at 1728.262 kb on - strand at 1728.265 kb on + strand at 1728.268 kb on - strand at 1728.338 kb on + strand at 1728.338 kb on + strand at 1728.338 kb on + strand at 1728.346 kb on - strand at 1728.403 kb on + strand at 1728.442 kb on + strand at 1728.450 kb on - strand at 1728.450 kb on - strand at 1728.450 kb on - strand at 1728.502 kb on + strand at 1728.526 kb on + strand at 1728.541 kb on + strand at 1728.633 kb on - strand at 1728.653 kb on + strand at 1728.653 kb on + strand at 1728.656 kb on - strand at 1728.656 kb on - strand at 1728.725 kb on - strand at 1728.735 kb on - strand at 1728.748 kb on - strand at 1728.758 kb on - strand, within Dshi_1663 at 1728.875 kb on + strand, within Dshi_1663 at 1728.944 kb on - strand, within Dshi_1663 at 1728.949 kb on - strand, within Dshi_1663 at 1728.996 kb on - strand, within Dshi_1663 at 1728.996 kb on - strand, within Dshi_1663 at 1729.037 kb on + strand, within Dshi_1663 at 1729.041 kb on - strand, within Dshi_1663 at 1729.045 kb on - strand, within Dshi_1663 at 1729.102 kb on + strand, within Dshi_1663 at 1729.103 kb on + strand, within Dshi_1663 at 1729.111 kb on - strand, within Dshi_1663 at 1729.111 kb on - strand, within Dshi_1663 at 1729.172 kb on - strand, within Dshi_1663 at 1729.195 kb on - strand, within Dshi_1663 at 1729.215 kb on - strand, within Dshi_1663 at 1729.215 kb on - strand, within Dshi_1663 at 1729.215 kb on - strand, within Dshi_1663 at 1729.220 kb on - strand, within Dshi_1663 at 1729.329 kb on - strand, within Dshi_1663 at 1729.329 kb on - strand, within Dshi_1663 at 1729.350 kb on - strand, within Dshi_1663 at 1729.456 kb on - strand, within Dshi_1663 at 1729.456 kb on - strand, within Dshi_1663 at 1729.497 kb on + strand, within Dshi_1663 at 1729.508 kb on + strand, within Dshi_1663 at 1729.532 kb on - strand, within Dshi_1663 at 1729.678 kb on - strand, within Dshi_1663 at 1729.680 kb on - strand, within Dshi_1663 at 1729.685 kb on - strand, within Dshi_1663 at 1729.763 kb on + strand, within Dshi_1663 at 1730.110 kb on - strand at 1730.110 kb on - strand at 1730.136 kb on + strand at 1730.167 kb on - strand at 1730.216 kb on + strand at 1730.270 kb on + strand, within Dshi_1664 at 1730.284 kb on - strand, within Dshi_1664 at 1730.309 kb on + strand, within Dshi_1664 at 1730.409 kb on - strand, within Dshi_1664 at 1730.535 kb on + strand, within Dshi_1664 at 1730.559 kb on - strand, within Dshi_1664 at 1730.579 kb on + strand, within Dshi_1664 at 1730.587 kb on - strand, within Dshi_1664 at 1730.587 kb on - strand, within Dshi_1664 at 1730.857 kb on - strand, within Dshi_1664 at 1730.929 kb on - strand, within Dshi_1664
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,727,662 + Dshi_1662 0.41 +0.3 1,727,705 + Dshi_1662 0.45 +1.2 1,727,730 + Dshi_1662 0.47 -0.3 1,727,730 + Dshi_1662 0.47 +0.6 1,727,738 - Dshi_1662 0.48 +0.8 1,727,775 - Dshi_1662 0.51 +0.2 1,727,805 - Dshi_1662 0.53 -0.0 1,727,821 - Dshi_1662 0.55 +0.3 1,727,873 - Dshi_1662 0.59 -2.2 1,727,970 + Dshi_1662 0.67 +0.3 1,727,984 - Dshi_1662 0.69 -1.3 1,727,997 + Dshi_1662 0.70 +0.2 1,728,125 + Dshi_1662 0.81 -2.1 1,728,165 + Dshi_1662 0.84 -1.0 1,728,165 - Dshi_1662 0.84 +0.7 1,728,200 + Dshi_1662 0.87 -0.7 1,728,221 + Dshi_1662 0.89 +2.5 1,728,247 - +0.2 1,728,247 - +2.8 1,728,262 - +0.8 1,728,265 + +1.0 1,728,268 - +0.4 1,728,338 + -0.8 1,728,338 + -0.1 1,728,338 + +1.6 1,728,346 - -1.2 1,728,403 + -2.3 1,728,442 + +1.0 1,728,450 - +0.5 1,728,450 - -0.4 1,728,450 - +0.0 1,728,502 + +0.2 1,728,526 + +0.7 1,728,541 + +1.6 1,728,633 - -2.2 1,728,653 + -0.7 1,728,653 + +0.6 1,728,656 - +0.2 1,728,656 - -1.5 1,728,725 - +1.3 1,728,735 - +0.3 1,728,748 - -0.1 1,728,758 - Dshi_1663 0.10 -0.0 1,728,875 + Dshi_1663 0.19 +2.1 1,728,944 - Dshi_1663 0.24 -4.6 1,728,949 - Dshi_1663 0.24 -0.4 1,728,996 - Dshi_1663 0.28 +1.6 1,728,996 - Dshi_1663 0.28 +0.2 1,729,037 + Dshi_1663 0.31 -3.8 1,729,041 - Dshi_1663 0.31 +0.7 1,729,045 - Dshi_1663 0.31 -1.1 1,729,102 + Dshi_1663 0.35 +1.4 1,729,103 + Dshi_1663 0.36 -0.5 1,729,111 - Dshi_1663 0.36 -0.4 1,729,111 - Dshi_1663 0.36 -1.3 1,729,172 - Dshi_1663 0.41 -0.5 1,729,195 - Dshi_1663 0.42 -0.5 1,729,215 - Dshi_1663 0.44 -0.0 1,729,215 - Dshi_1663 0.44 +0.8 1,729,215 - Dshi_1663 0.44 +0.4 1,729,220 - Dshi_1663 0.44 -0.7 1,729,329 - Dshi_1663 0.52 -0.9 1,729,329 - Dshi_1663 0.52 -2.2 1,729,350 - Dshi_1663 0.54 +0.3 1,729,456 - Dshi_1663 0.61 -0.6 1,729,456 - Dshi_1663 0.61 -0.4 1,729,497 + Dshi_1663 0.64 -0.0 1,729,508 + Dshi_1663 0.65 -0.4 1,729,532 - Dshi_1663 0.67 +0.7 1,729,678 - Dshi_1663 0.78 -0.1 1,729,680 - Dshi_1663 0.78 -1.4 1,729,685 - Dshi_1663 0.78 +0.9 1,729,763 + Dshi_1663 0.84 -0.3 1,730,110 - -0.8 1,730,110 - -0.9 1,730,136 + +0.5 1,730,167 - +0.6 1,730,216 + +0.5 1,730,270 + Dshi_1664 0.13 -0.9 1,730,284 - Dshi_1664 0.15 -0.0 1,730,309 + Dshi_1664 0.17 -0.7 1,730,409 - Dshi_1664 0.26 +1.8 1,730,535 + Dshi_1664 0.38 -4.0 1,730,559 - Dshi_1664 0.40 -0.0 1,730,579 + Dshi_1664 0.42 -0.2 1,730,587 - Dshi_1664 0.43 -0.4 1,730,587 - Dshi_1664 0.43 +2.1 1,730,857 - Dshi_1664 0.68 -0.5 1,730,929 - Dshi_1664 0.74 +0.3
Or see this region's nucleotide sequence